Shinella oryzae: K6301_11110
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Entry
K6301_11110 CDS
T08112
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
soj
Shinella oryzae
Pathway
soj01501
beta-Lactam resistance
soj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6301_11110
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_11110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_11110
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_11110
Transporters [BR:
soj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6301_11110
Antimicrobial resistance genes [BR:
soj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K6301_11110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF222
SecD_SecF_C
TMP_N
Motif
Other DBs
NCBI-ProteinID:
UPA23733
LinkDB
All DBs
Position
2263383..2266694
Genome browser
AA seq
1103 aa
AA seq
DB search
MNFSAWSIRNPIAPLLAFALLLYVGIQSFYSLPITRFPNIDVPVIAISVTQSGAAPAELE
VQVTKEIEDAVAGIEGVDDIVSTVTDGSSVTSVLFKIEKPTNQALQDVKDAIDRIRSDLP
ASIEEPVVSKIDVEGQAIQTFAVSSPNMTLEELSWFVDDKVKRALQGQPGIGKIDRFGGA
DREVRVDLNQDKLDSYGISAADVNRQIRSMNADAGSGRGQIAGAEQAIRTLGDARSVEKL
TNTMIALPNGRFVRLSELGKISDTYEEPRSFSRFNGNPVVTFAVFRSKGASEVTVAGSVE
KALGSVRTQNPDVSIEMVDDAVYFTYGNYEAALHTLIEGALLAVAVVLLFLRNWRATLIS
AVALPLSAIPTFFVMDMLGFSLNLVSFLALTLATGILVDDAIVEVENIARHIRMGKSPYR
AAIEAADEIGLAVIATTFTIIAVFVPVSFMPGIPGQYFIQFGLTVAVAVFFSLAVARLIT
PVMAAYLMRSSDADGHGEEKEGRFMRGYTWLVSKTTGTWYARYATLLGAFAFLIASVMLL
FTVPGSFMPPEDASRVVLSVELPPDAMLDDTDRTTTQVYDKVKDIDGVKSVFVLGGSSPK
GDLELRRASVTVILDRLEHSLAYRLVNDVLGGIPVIGPYLPKMEAHGRLRPQWDIEKEIF
AKLRDIPDVRIIKLNDRGERDLAFNLLSNNEADLNDTVAVLEAKLRADPLLANVSSEGSL
PRPELQIRPRDDQMARFGITTAQISEVVRVATIGDIDSQLSKVSLDNRLIPIRVQVDRAF
RTDLAAIRNLKIQTAGGQFVPLSSVADIDYSEGPSAVKRHNRNRVVSIGSDLQQGVALDT
ATARFKEIASGIDMPSTVQFAESGDAEIQAEMQQSFGNAMLLGLLLVLMVLILLFKDVIQ
PFTILLSLPLAIGGVAAGLILTQNALSMPVLIGILMLMGIVTKNAILLVDFAIEMRHAGM
ERVEAMIEAGRKRARPIVMTSIAMSAGMLPSALGVGEGGAFRSPMAIAVIGGIIVSTVLS
LVVVPSFFLIMDDLSRFLGWAFGRFVGKKDDELLAMEPQALTQLADQTARTVTELEKRIE
TLEKKNGERKPFTVVHHSTLAAE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcagcttggtccatccgcaacccgattgcgccgctgctcgctttcgcgctg
ctgctctatgtcggcatccagtccttctattcgctgccgatcacgcgcttccccaatatc
gacgttcccgtcatcgccatttcggtgacgcagagcggcgctgctccggccgagcttgag
gtccaggtcaccaaggaaatcgaggacgccgtcgccggcatcgaaggcgtggacgacatc
gtgtcgaccgtcacggacggcagctccgtcacatccgttctcttcaagatcgaaaagccc
acgaaccaggcgctgcaggacgtcaaggacgcgatcgaccgcatccgcagcgacctgccg
gcctccatcgaggagccggtcgtcagcaagatcgacgtggagggccaggcgatccagacc
ttcgccgtctcctcgccgaacatgacgctggaagagctgtcatggttcgtcgacgataag
gtcaagcgcgcgcttcagggccagccgggcatcggcaagatcgaccgcttcggcggcgcc
gaccgcgaggtgcgcgtcgacctcaaccaggacaagctcgattcctacggcatttccgcc
gccgacgtgaaccgccagatccgcagcatgaacgccgatgccggctccggccgcggccag
atcgccggcgccgaacaggccatccgcacgctcggcgacgcccgctcggtcgagaagctg
acgaacacgatgatcgcgctgccgaacggccggttcgtgcggctttccgaactcggcaag
atttccgatacctacgaggagccgcgctccttctcgcgcttcaacggcaatccggtcgtg
acctttgccgtcttccgctcgaaaggggcaagcgaggtgaccgtcgccggctccgtcgag
aaggcactgggcagcgtgcgcacacaaaatcccgacgtgtcgatcgagatggtggacgat
gccgtctacttcacctacggcaactacgaggcagcacttcacacgctgatcgaaggcgca
ttgctggcggtcgccgtcgtgctgctcttcctgcgcaactggcgggcgacgctgatttcc
gcggtcgcgctcccgctctcggcgatcccgacattcttcgtcatggacatgctgggcttc
tcgctgaacctcgtgtcgttcctggcgctgacgctcgcgacggggatcctcgtggacgat
gccatcgtggaggtcgagaacatcgcgcgccacatccgcatgggaaaatcgccctatcgc
gccgcgatcgaggcggccgacgagatcggccttgcggtgatcgcgaccaccttcaccatc
atcgcggtcttcgtgccggtgtcgttcatgccgggcataccgggccagtacttcatccag
ttcggcctgaccgtggctgttgcggtgttcttctcgcttgcggtggcccgcctgatcacg
ccggtcatggcggcctatctgatgcgctccagcgatgccgacggccatggcgaagagaag
gaaggccgcttcatgcgcggctacacctggctcgtcagcaagacgaccggcacatggtat
gcccgctacgccacccttctcggcgccttcgccttcctgatcgcctccgtcatgctgctc
ttcacggtgcccggcagcttcatgccgccggaagacgcgtcccgcgtcgtgctgtcggtc
gaactgccgccggatgcgatgctcgacgataccgaccgcacgaccacgcaggtctatgac
aaggtcaaggatatcgacggcgtgaaaagcgtcttcgtgctgggcggttcctcaccgaag
ggcgatctggaactgcgccgcgcctccgtcaccgtcatcctcgacagactggagcattcc
ctcgcctaccggctggtgaacgacgttctcggcggcattcccgtgatcggcccctacctg
ccgaaaatggaagcgcatggccgcctgcggccgcaatgggatatcgagaaggagatcttc
gccaagcttcgcgatatccccgacgtgcgcatcatcaagctcaacgatcgcggcgagcgc
gaccttgccttcaacctgctctccaacaacgaggcggacctgaacgacacggtcgcggtg
ctggaagccaagctgcgcgccgacccgctgctggccaatgtcagctcggaaggctcgcta
ccgcgaccggaactgcagatccgcccgcgcgacgaccagatggcccgcttcggcatcacc
accgcgcagatatcggaggtcgtgcgcgtcgcgaccatcggcgatatcgactcgcagctc
agcaaggtctcgctcgacaaccgcctcatccccatccgcgtgcaggtggaccgcgcgttc
cgcaccgatctcgccgccatccgcaacctgaagatccagaccgcgggcggccagttcgtg
ccgctctccagcgtcgccgatatcgactattcggaaggcccgagcgccgtgaagcggcac
aaccgcaatcgtgtcgtctcgatcggctccgatctccagcagggcgtagcgctcgacacc
gcaaccgcccgtttcaaggagatcgcctcgggcatcgacatgccgtcgacggtccagttc
gccgaaagcggtgacgcggaaatccaggccgagatgcagcaatccttcggcaacgccatg
ctgctcggcctgctgctcgtgctgatggtgctgatcctgctgttcaaggatgtgatccag
cccttcaccatccttctgtcgctgccgcttgccatcggcggcgtggcggccggtctcatc
ctcacgcagaacgcgctttccatgcccgttctcatcggcattctcatgctgatgggcatc
gtgaccaagaacgccatcctgctcgtcgatttcgccatcgagatgcgccatgccggcatg
gagcgcgtggaagccatgatcgaggcgggccgcaagcgcgcgcgtccgatcgtcatgacg
tccatcgccatgtccgccggcatgctgccgtctgcgctcggcgtcggcgaaggcggcgcc
ttccgctcgcccatggcgatcgcggtgatcggcggcatcatcgtctcgaccgttctctcg
ctggtcgtcgtgccgtccttcttcctgatcatggacgacctttcgcgcttcctcggctgg
gccttcggccgtttcgtcggaaagaaggacgacgagttgctggccatggaaccgcaggcg
ctgacacagctcgccgaccagacggcacgcaccgtcacggaactggaaaagcgcatcgag
acgctcgaaaagaaaaacggcgagcgaaagcccttcaccgtggtgcatcactccacgctc
gcggcagagtaa
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