Shinella oryzae: K6301_13635
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Entry
K6301_13635 CDS
T08112
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
soj
Shinella oryzae
Pathway
soj00020
Citrate cycle (TCA cycle)
soj00785
Lipoic acid metabolism
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
soj01120
Microbial metabolism in diverse environments
soj01200
Carbon metabolism
soj01210
2-Oxocarboxylic acid metabolism
Module
soj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
soj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
K6301_13635
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
K6301_13635
Enzymes [BR:
soj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
K6301_13635
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
SHOCT
Motif
Other DBs
NCBI-ProteinID:
UPA24178
LinkDB
All DBs
Position
complement(2792326..2795322)
Genome browser
AA seq
998 aa
AA seq
DB search
MARQDANEQFLATSFLDGANAAYIEQLYAQYEANPASVGEEWQAFFKALEDQPSDVVKAA
KGASWKRANWPIAANGELVSALDGNWGVVEKVLEKKVQAKAEAAAAQTGTPVNQADVNQA
TRDSVRAIMMIRAYRARGHLHAKLDPLAIAAPVEDYHELSPSNYGFEEKDLDRKIFIDNV
LGLEYATVREMVEILERTYCSTIGVEFMHISNPEEKGWIQERIEGPDKGVDFTPEGKKAI
LQKLIEAEGFEQFIDVKYKGTKRFGLDGGEALIPALEQIIKRGGQLGLKEIVLGMAHRGR
LNVLTNVMAKPHRAVFHEFKGGSYAPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERAKVMPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTVHVIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVTY
AAKVATEFRMKFHKPVVLDIFCYRRFGHNEGDEPAFTQPKMYKAIRAHKTVVSLYGARLI
AEGVISEGEFEKMKADWRANLEQEFEAGQSYKPNKADWLDGAWSGLRSADNQDEQRRGKT
SVPMKQLKEIGRKIATIPEGFKAHKTIQRFMDNRMQMIETGEGIDWAMGEALAFGTLCVE
GTKIRLSGQDCERGTFSQRHSVLYDQETEDRYIPLSNLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVIFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERFLQLCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLIMMTPKSLLRHKRA
VSSLSEMAGETSFHRLLWDDAEVIKDGPIKLQKDAKIRRVVMCSGKVYYDLLEEREKRGI
DDVYLLRLEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWAFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaagacgccaacgaacaattcctggccacttccttcctcgacggagcgaac
gcggcctatatcgagcagctctacgcccagtacgaggcgaatcccgcctccgtcggcgag
gaatggcaggccttcttcaaggccctcgaagaccagccttccgatgtcgtgaaggctgcc
aagggtgcttcgtggaagcgcgcgaactggccgatcgccgccaatggcgaactcgtctcc
gcgctcgacggcaattggggcgtcgtcgaaaaggttctggaaaagaaggtgcaggcgaag
gctgaagccgccgccgcgcagacaggcacgcccgtcaaccaggccgacgtcaaccaggcg
acgcgcgacagcgtgcgcgccatcatgatgatccgcgcctaccgcgcccgcggccacctg
cacgccaagctcgacccgctcgccatcgcggcacccgtcgaggactatcacgagctttcg
ccgtcgaattacgggttcgaggagaaggatctcgaccgcaagatcttcatcgataacgtg
ctcggcctcgaatacgccaccgtgcgcgaaatggtcgaaatcctcgagcgcacctactgc
tcgacgatcggcgtcgaattcatgcacatctccaacccggaagagaagggctggatccag
gagcgcatcgaaggcccggacaagggcgtcgatttcacgcccgagggcaagaaggcgatc
ctccagaagctgatcgaggccgaaggtttcgagcagttcatcgacgtcaagtacaagggc
accaagcgtttcggcctcgatggcggcgaagcgctgatcccggcgctggagcagatcatc
aagcgcggcggtcagctgggcctcaaggaaatcgtgctcggcatggcccaccgcggccgc
ctgaacgttctcaccaatgtgatggccaagccccaccgcgccgtgttccacgagttcaag
ggcggctcctacgcgcctgacgacgtcgaaggctccggtgacgtgaagtatcacctcggc
gcctcctcggaccgcgagttcgacggcaacaaggtgcacctgtcgctgacggccaaccct
tcgcatctcgagatcgtcaaccctgtcgtgatgggcaaggcccgcgccaagcaggaccag
atggcgacggtcttcgagggcgatatcatcccgctacgcgaacgcgcgaaggtgatgccg
ctcttgctgcacggcgatgcggccttcgcgggccagggcgtcgtggccgaaatcctcggc
ctgtccggcctgcgcggccaccgcgtcgccggcacggtccacgtcatcatcaacaaccag
atcggcttcaccacgaacccggccttctcgcgctcttcgccctatccgtcggacgtggcc
aagatgattgaggcgccgatcttccatgtgaacggcgacgatccggaagcggtgacctat
gccgcgaaggtcgcgaccgaattccgcatgaagttccacaagccggtcgtgctggacatc
ttctgctaccgccgcttcggccacaacgaaggcgacgagccggcgttcacgcagccgaag
atgtacaaggcgatccgcgcccacaagaccgtggtcagcctctatggcgcgcggctcatt
gccgaaggcgtcatctcggaaggcgaattcgagaagatgaaggccgactggcgcgccaat
ctcgaacaggagttcgaggccggccagtcctacaagccgaacaaggccgactggctcgac
ggtgcatggtcgggcctgcgctcggccgacaaccaggacgaacagcgccgcggcaagacc
tcggtgcccatgaagcagctcaaggaaatcggccgcaagatcgcgacgatcccggaaggc
ttcaaggctcacaagaccatccagcggttcatggacaaccgcatgcagatgatcgagacg
ggcgagggcatcgattgggcgatgggcgaggctctggccttcggcacgctgtgcgtggaa
ggcaccaagattcgcctctccggtcaggattgcgaacgcggcacgttctcgcagcgtcac
tcggttctctacgatcaggagaccgaagaccgctacattccgctctccaacctgtcgccc
acgcaggcgcgctacgaggtcatcaactcgatgctctcggaagaagcggtgctcggtttc
gaatacggctactcgctggcccgtccgaacgcgctgaccctttgggaagcccagttcggc
gacttcgccaatggtgcgcaggtcatcttcgaccagttcatctcgtcgggcgaacgcaag
tggttgcgcatgtcgggccttgtctgccttctgccgcatggttacgagggccaggggccg
gagcattcctccgcccgtcttgagcgcttcctgcagctctgcgcggaagacaacatgcag
gtcgccaacgtcacgacgccggcgaactatttccacatcctgcgccgccaggtgaagcgc
gatttccgcaagccgctcatcatgatgacgccgaagtcgctgctgcgccacaagcgggcc
gtctcgtcgctgtcggaaatggcgggggaaacctccttccaccgcctgctgtgggacgac
gccgaggtgatcaaggacggtccgatcaagctccagaaggacgccaagatccgccgtgtc
gtcatgtgctcgggcaaggtctactacgacctgctggaagagcgcgaaaagcgtggtatc
gacgatgtctacctgctgcgtctggaacagctctatccgttcccggccaaggcgctgatc
aacgagctttcgcgcttccgcaacgccgagatggtgtggtgccaggaagagcccaagaac
atgggcgcctgggcgttcatcgacccttatctcgaatgggtgctcgcccatatcgacgcc
aagtaccagcgcgtgcgctacaccggccgtccggctgccgcatcgccggcaacgggcctg
atgtcgaagcacctcgcgcagctcgctgccttcctcgaggacgcgctgggcggttga
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