KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_03150
Entry
SOMG_03150        CDS       T09274                                 
Symbol
lsm3
Name
(RefSeq) Lsm2-8 complex subunit Lsm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018  RNA degradation
som03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SOMG_03150 (lsm3)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOMG_03150 (lsm3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:som03019]
    SOMG_03150 (lsm3)
   03041 Spliceosome [BR:som03041]
    SOMG_03150 (lsm3)
Messenger RNA biogenesis [BR:som03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SOMG_03150 (lsm3)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SOMG_03150 (lsm3)
Spliceosome [BR:som03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SOMG_03150 (lsm3)
 Complex C
  U2 snRNP components
    SOMG_03150 (lsm3)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 80876630
NCBI-ProteinID: XP_056038289
UniProt: A0AAE9WEZ7
LinkDB
Position
2:complement(join(1432087..1432124,1432339..1432453,1432521..1432538,1432597..1432689,1432728..1432745))
AA seq 93 aa
MESTQSVAEPLDLVRLSLDENVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIITIIDEE
EPTEGQAFKNIRKHYEMLFVRGDSVILIAPPRT
NT seq 282 nt   +upstreamnt  +downstreamnt
atggaatctactcaatctgtcgctgaaccactggatttggttcgcctttcacttgacgaa
aatgtttatgtaaagttacgaggagatcgtgaattgaatggacgtcttcatgcttatgac
gagcatctgaatatggttctaggagatgctgaagaaataattacaattattgatgaagaa
gaacccacagagggacaggcattcaaaaacattcgaaaacattatgagatgctttttgtt
cgtggtgattccgttatcctcattgcacctcctcgtacctaa

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