KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_04476
Entry
SOMG_04476        CDS       T09274                                 
Symbol
spf30
Name
(RefSeq) splicing factor Spf30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SOMG_04476 (spf30)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:som03041]
    SOMG_04476 (spf30)
Spliceosome [BR:som03041]
 Complex A
  U2 snRNP components
   U2 related factors
    SOMG_04476 (spf30)
 Complex B
    SOMG_04476 (spf30)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    SOMG_04476 (spf30)
SSDB
Motif
Pfam: Tudor_3 TUDOR DUF4537 53-BP1_Tudor POP1_C
Other DBs
NCBI-GeneID: 80877949
NCBI-ProteinID: XP_056039590
UniProt: A0AAF0AY91
LinkDB
Position
3:911933..912886
AA seq 317 aa
MEDEYKQYQSQLALVKISLEKDPANQELLALQNDLDELVHLTQQLINEKEQETQKQKKLE
ENGQSTTGSKSLANAQKLELFPGDLVMARWTSGDYSFYAGKITAISGHGANKKYTIQFLD
YPEVETVSPQNLKAMPEAKRRSIAMLGSSNNALRAGLSPIPTASVVPSRSISPNSSSKTQ
PFKASPERVFSPTTSAPPSKVVPVGSIPTTSRPPPPTIVPEPPAIATPPPLPSQKPKKQL
KPNAALEASKNSWKQFASRGVKTGRIGKRKKIGETSMFRSPEDAADRVGFMGGNRGSTKA
APREKHVYKYKEDEDNE
NT seq 954 nt   +upstreamnt  +downstreamnt
atggaggatgaatacaaacaatatcaaagccaacttgcattagtaaaaatttccctcgaa
aaggaccccgctaatcaagaattacttgctttacaaaatgatttagatgaattagttcac
ttgacccaacagttaataaatgaaaaagagcaagaaacccaaaagcaaaaaaaattggaa
gagaatggacagtcaacaacaggctcaaaatctttggccaatgctcaaaaattagaatta
ttccctggcgatttggtaatggcaaggtggacttcgggagactactctttctatgctgga
aaaataacagccatatcaggacacggtgccaacaaaaaatatacaattcagtttttggat
tatcccgaagttgagacagtatcccctcaaaacttaaaggccatgcctgaagcgaaacgc
aggagtatagctatgttaggctcttctaacaatgctcttcgtgctggcctttctcctatc
ccgaccgcatctgtggttccttctcgtagtatttcaccgaattcttcttctaaaactcag
ccttttaaggcctctccggaacgtgtgttttctccaacaaccagtgctcctccctcaaaa
gttgtccctgtaggttcaatacccaccacctcaagacctcctcctccgactattgtcccc
gagcctcctgcaattgctacacctcctccgcttccttctcaaaagccaaagaagcaactc
aaacccaatgccgccttggaagcttctaagaactcttggaaacagtttgcctcaaggggt
gtgaaaacaggacgaatcggtaaacggaaaaaaattggagaaactagtatgttccgcagt
cctgaagatgctgctgatcgagtgggattcatgggaggcaatcgaggttctaccaaagct
gccccacgagaaaaacatgtatataaatataaggaggacgaggataatgaataa

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