Shewanella oneidensis: SO_0874
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Entry
SO_0874 CDS
T00099
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
son03000
]
SO_0874 (dksA)
03021 Transcription machinery [BR:
son03021
]
SO_0874 (dksA)
03009 Ribosome biogenesis [BR:
son03009
]
SO_0874 (dksA)
Transcription factors [BR:
son03000
]
Prokaryotic type
Other transcription factors
Others
SO_0874 (dksA)
Transcription machinery [BR:
son03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
SO_0874 (dksA)
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
rRNA transcription factors
SO_0874 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DZR
Motif
Other DBs
NCBI-ProteinID:
AAN53950
UniProt:
Q8EIG5
LinkDB
All DBs
Position
complement(904132..904575)
Genome browser
AA seq
147 aa
AA seq
DB search
MPEGTKKLGVLAIAGVSPYQEKPGEEYMNAKQLGHFKTILEAWRNQLREEVDRTLSHMQD
EAANFPDPVDRAAQEEEFSLELRARDRERKLIKKIEKTLQKIEEDDFGFCDSCGIEIGIR
RLEARPTADQCIDCKTLAEIKEKQMAG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcaccaaaaaacttggcgtactcgctatcgcaggtgtaagtccctaccag
gaaaaacccggtgaggagtatatgaacgctaagcaactgggtcacttcaagacaattctt
gaagcttggcgcaatcagttgcgtgaagaggtcgaccgtactctgagtcacatgcaggat
gaagcagcaaactttcccgatcctgtagaccgtgcagcacaggaagaagagttcagtctc
gaattacgtgcgcgcgacagagaacgtaaactgatcaagaagatcgaaaagaccctacaa
aaaatcgaagaagacgattttggcttctgcgattcttgcggtatcgaaatcggcattcgc
cgtctcgaagcgcgtccaacagctgatcaatgtatcgactgtaaaacgcttgcagagatc
aaagagaagcaaatggcgggttaa
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