Shewanella oneidensis: SO_0980
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Entry
SO_0980 CDS
T00099
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil747-C5)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
son03009
]
SO_0980 (rumB)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SO_0980 (rumB)
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SO_0980 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_25
Methyltransf_12
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AAN54054
UniProt:
Q8EI67
LinkDB
All DBs
Position
1009602..1010762
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AA seq
386 aa
AA seq
DB search
MSTLVQCGYFERGQCQSCRHIKLPMVQQLAAKTQELQQLLAPFVVSTNTQFLPPVVGEDS
GFRNKAKMVVLGAAHAPVLGIVSPNGEAVSLCDCLLYPADMQALLYRLERFVQQAGIPPY
RIDKAKGELKYILLTRSQVRGEYMLRFVLRSPDAIARIERELPALMAEYPQINVVSVNIQ
PIHMAILEGDEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPHVAAKLYQTAREWVGEFA
PKSLWDLFCGVGGFGLHCASKDIPLTGIEIEAEAIACAKMSAQMMGLDNVQFMALDSTDF
AKGDAAATKPDLIIVNPPRRGIGESLCDALSEFAPRAILYSSCNPKTLAKDLVHIRGYQL
TRVQLFDLFPHSDHFEVLAMLVKDSR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacattagtgcaatgtgggtattttgaacgaggccaatgccaatcctgtcgccat
attaagctcccgatggtgcagcaattggcggcgaaaacccaagaattgcaacaattgtta
gccccttttgttgtgagcactaatacccaatttttgccacccgtagtgggtgaggacagc
ggctttcgtaacaaggcgaaaatggtggtgcttggcgctgcccatgcgcctgtgctgggg
attgtcagtccaaatggcgaagcggttagtctctgtgactgcttgctgtaccctgcagat
atgcaagcgttgctctatcgcctagagcgttttgtgcagcaagcgggtatcccgccttat
cgcattgataaagccaagggcgagcttaagtatattctgctgacccgaagccaagttcgt
ggtgaatatatgctgcgttttgtgctgcgatcacccgatgccatcgctcgtatcgaacgg
gaattacccgcgctgatggctgaatatccacaaatcaacgtcgtgtcggtaaatattcag
cccattcatatggcgatccttgagggggatgaggaaattttcttaactgaaaatactcgt
ctcgaagagcgctttaacgatgtgcctttgtttattcgtccaaaaagctttttccaaact
aatccacacgttgctgcaaagctgtatcaaaccgcccgtgagtgggttggcgaatttgca
ccaaagtcactgtgggatttattttgtggtgtgggcggctttggcttgcactgcgcctct
aaagatattccgctaacaggcattgaaatcgaggctgaagcgattgcgtgcgctaagatg
tcagcgcaaatgatggggctcgataacgtgcagtttatggcgctcgactctaccgatttt
gccaaaggtgatgcggccgcaaccaagcctgatttaattattgtcaatccgccgcgccgc
gggattggtgagtccctatgtgatgctttaagtgaatttgcccctagggcgattttgtat
tctagttgtaatcctaaaacgctggcgaaggatttagttcatattcgtggctaccagtta
actcgggtgcaactgtttgatctgtttccccactcggatcactttgaagttttagccatg
ttggtaaaagattcgcgttag
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