Shewanella oneidensis: SO_1030
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Entry
SO_1030 CDS
T00099
Symbol
metH
Name
(GenBank) B12-dependent 5-methyltetrahydrofolate--homocysteine methyltransferase MetH
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
son
Shewanella oneidensis
Pathway
son00270
Cysteine and methionine metabolism
son00450
Selenocompound metabolism
son00670
One carbon pool by folate
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01230
Biosynthesis of amino acids
son04981
Folate transport and metabolism
Module
son_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SO_1030 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SO_1030 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SO_1030 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SO_1030 (metH)
04980 Cobalamin transport and metabolism
SO_1030 (metH)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
SO_1030 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AAN54103
UniProt:
Q8EI23
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All DBs
Position
complement(1066803..1070537)
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AA seq
1244 aa
AA seq
DB search
MAISPNRASHTLADIRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNN
DLLVLTQPHIIKQIHTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLARE
ACDAIEQATGKPRYVAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGG
ADIIMVETIFDTLNAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTE
AFYNSLRHIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPE
DMAKVIQEWAREGMLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLT
IDAQTLFVNVGERTNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDG
VEIMHKFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQ
ATLVKRYGAAAIIMAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIA
TGIDEHDNYAVDFIDAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIK
VGMDMGIVNAGQLAIFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSS
SAKKEDLEWRSWPVNQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVG
DLFGSGKMFLPQVVKSARVMKKAVAYLNPFIEKEKVAGQSNGKILMVTVKSDVHDIGKNI
VGVVLACNGFEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREG
LTIPAIIGGATCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLVNNETRQATIDETYA
EYDDMRTKRLSQAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDR
IDWTPFFRAWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPA
NTVGFDDIELYTDETRTEVELTTHHLRMQLERVGNDNFCLADFVAPKDSGVADYMGGFAV
TAGHGIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNE
ALIREKYKGIRPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSGWYFA
HPKSRYFGVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYDPE
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatcacccaatcgagcgagccacacactggcagacattcgtaaccagctgtcg
acgcgcattctgatcttagacggtgccatgggcacgatgatccaaggctacaagctggaa
gaagccgattatcgcggcgagcgtttcaaggattggcataccgatgtaaagggtaataac
gacctgttagtcctgactcagccacatattatcaaacaaattcacaccgactacttatta
gccggtgccgatattattgaaaccaatacctttaacgccaccactatcgccatggccgat
tatgacatgcagtcattgtccgccgaaattaaccgcgaaggcgcgcgccttgcgcgtgag
gcctgtgatgcaatcgaacaggccacaggcaagccacgttacgtcgctggtgtgttaggg
cccactaaccgtacctgctctatcagccccgatgtgaacgaccctggctttcgtaatatc
cacttcgatgagttagtgaccgcttactgcgaatcgacccgcgcgctgattgagggcggt
gccgatatcattatggtcgagaccattttcgataccttaaacgccaaggcagcgctattt
gccatcgaaaccgtattcgatgaactgtttggcgctaactcgcctgcgcgtttgccagtg
atgatctccggcaccattaccgatgcctcgggccgtaccctgaccggacaaaccaccgaa
gccttttataactcccttcgccatatcaagccgttatctatcggccttaactgcgccctt
gggccaaaagagctgcgtccctacgttgaagaactgtcacgcatcgccgaatgttatgtg
tcggcgcaccctaacgcaggtttaccaaacgagtttggcggttacgatgaaaccccagag
gacatggccaaggttatccaagaatgggcccgtgaaggcatgctcaacattatcggcggc
tgctgtggtagcacgcccgagcatattaaggtcattcgtgaagccgtggagcagtttgca
ccgcgcgtattacccgagatccctgtcgcctgtcgcctcgcgggtttggaaccgctcact
atcgacgcccaaaccctgtttgtgaacgtgggcgagcgcactaacgttactggctcggcc
aaatttttaaagctgattaaagaaggcaagttcgagcaagcgctcgacgtcgcccgtgaa
caggtagaaagcggcgcgcagatcatcgacatcaacatggacgaaggcatgcttgatggc
gtggagatcatgcacaagtttttaaacttgatcgcctctgagccagatatcagccgcgtg
ccgattatgatcgactcctcgaagtgggaagtgattgaagcgggcctcaaatgtattcaa
ggcaaaggcattgttaactcaatctccttgaaggaaggcgaagagaagtttatcgagcaa
gcgaccctcgttaaacgctatggcgcagcagccattattatggcgttcgacgagcaaggc
caagccgacactaaagcacgcaaagtcgagatctgtacccgcgcctaccgcgtgctggtc
gataaggtgggtttcccgcccgaagacattatcttcgacccgaatatcttcgcgattgcc
acaggtatcgatgagcacgataactatgctgtcgattttattgatgccattaaagagatt
aaagccaccctgccccatgcaatgatttccggcggggtgtcgaacgtgtcgttctccttc
cgcggtaacaacccagtgcgtgaggcgattcacgcggtatttttgtaccacgccattaaa
gtcggcatggatatggggattgtcaacgcgggccaattagcgatttttgacgatatcgac
cccgagcttaaagtgcgggtcgaaaacgtggtgctcaacctaccttgcccggttgaaggc
tcgaacaataccgagcaattgcttgagattgctgaaaaattccgtggcgatggttcaagt
agcgccaaaaaagaagatttagaatggcgctcatggcctgttaatcagcgtttagcccat
gcgctggtcaaaggcatcaccgagtttattgatgaagataccgaagccgctcgccaagcc
gcctcacgtccgctggatgtgattgaaggcccgctgatggacggcatgaatatcgtcggc
gacctgtttggctcgggcaaaatgttcctgccacaggtggtcaaatccgcgcgggtgatg
aaaaaggccgtggcctacctcaatccctttattgaaaaggaaaaagtcgcaggtcagtcg
aacggtaagattttgatggtgaccgtaaaaagcgatgtgcacgatatcggcaaaaatatt
gttggcgtggtactcgcctgtaatggctttgaagtgttcgatttaggcgtgatggtgtcg
gtagagcgcattcttgaggcggtgaaagaacacaatatcgatattatcggcatgtctggg
ctgattaccccaagccttgatgagatggtgcataacgtcaaaaccttccaccgtgaaggc
ctcaccattccggcgattatcggcggcgcaacctgctcgaaaatccatacggcggtgaag
attgcgccccattatccccatggcgcgatttacattgccgacgcctcccgcgccgtgccc
atggtcagcaaactggtcaataacgaaacccgccaagcaaccattgatgaaacctatgcc
gagtacgacgatatgcgcaccaagcgtttatcccaagctaagcgtaaggaaatcgtctcg
ctagaggccgcccgcgaaaaccgctgccagcacgactgggccaattacagcccatttaag
ccaaacgtactcggtcgccaagtgtttgatgattatccattaaccgatttagtcgaccgt
atagactggacgccgttcttccgcgcgtgggagctgcacggccattaccctgaaatctta
agcgataaagtggtgggcgttgaggcgcaaaaactgtttagcgacggcaaggcgatgctt
aaaaaaatcatcgaagaaaagtggctcaccgccaagggcgtgattgggctgtttcccgct
aacacagttggctttgatgatatcgagctttataccgacgagactcgcacagaggttgag
ctgaccactcatcacctgcggatgcagcttgagcgggtgggtaacgataacttctgtctg
gccgattttgtcgcgcccaaagacagcggcgttgccgactatatgggcggctttgcggtc
accgcaggtcatgggattgatgagcatgtcgcccgctttgaggcaaatcatgatgactac
aacgccattatgctcaaatgcttagccgaccgtttagccgaagcctttgccgagcggatg
cacgagcgcgtacgtaaagagttttgggggtatgccgccgatgagcagctcgataacgag
gcgttaattcgcgaaaaatacaagggcattcgccccgcaccgggttaccccgcttgcccg
gatcacaccgaaaaaggcctgctgtgggaactgttaaagccgaatgaaaccatcgactta
aacattaccgaaagctacgccatgttccccaccgccgcagtatctggctggtatttcgcc
cacccgaaatcccgctactttggcgtgagcaatattggtcgcgatcaggtggaggattac
gctaagcgcaaggggatgactgttgccgagacggagaagtggctggcgccagtgttggat
tatgaccctgaatag
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