Shewanella oneidensis: SO_1924
Help
Entry
SO_1924 CDS
T00099
Name
(GenBank) RND superfamily efflux pump permease component 2
KO
K18138
multidrug efflux pump
Organism
son
Shewanella oneidensis
Pathway
son01501
beta-Lactam resistance
son01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
son00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SO_1924
01503 Cationic antimicrobial peptide (CAMP) resistance
SO_1924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_1924
01504 Antimicrobial resistance genes [BR:
son01504
]
SO_1924
Transporters [BR:
son02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SO_1924
Antimicrobial resistance genes [BR:
son01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SO_1924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6286
Motif
Other DBs
NCBI-ProteinID:
AAN54975
UniProt:
Q8EFP6
LinkDB
All DBs
Position
complement(2024541..2027816)
Genome browser
AA seq
1091 aa
AA seq
DB search
MSIISTSVKRPVTVWMFMLAIMLFGMVGFSRLAVKLLPDLSYPTLTIRTMYDGAAPVEVE
QLVSKPIEEAVGVVKGLRKISSISRSGMSDVVLEFEWGTTMDMASLDVREKLDTIALPLD
VKKPLLLRFNPNLDPIMRLALSVPNASEAELKQMRTYAEEELKRRLEALSGVAAVRLSGG
LEQEVHIQLNQEKLSQLNLNADDIKRRINEENINLSAGKVIQGDREYLVRTLNQFNSLDE
LGQVIVYRDAQTLVRLFEVATITDAYKERSDITRIGSQESIELAIYKEGDANTVAVAKKL
RDELVKINKDPQQNKLEVIYDQSEFIESAVSEVTSSALMGSVLAMLVIYLFLRNIIPTLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAIGLLVDNAIVVLENIDRCRSEGMSKL
DAAVTGTKEVAGAIFASTMTTLAVFVPLVFVDGIAGALFSDQALTVTFALLASLLVALTS
IPMLASREGFKILPELMKKTPKEKPTTKLGKLKHYSATVFSFPIVLLFNYLPSALLTFVL
IIGRFFSWLLGLIMRPLSSGFNFVYHSTESIYHKLLAIALRKQLATLLLTTGITGACISL
LPRLGMELIPPMNQGEFYVEILLPPGTAVGETDRILQQLALSIKDRPEVKHAYSQAGSGG
LMTSDTARGGENWGRLQVELVDHSAYHQVTQVLRDTARRIPALEAKIEQPELFSFKTPLE
IELTGYDLALLKRSADSLVNALSASDRFADINTSLRDGQPELSIRFDHARLAALGMDAPT
VANRIAQRVGGTVASQYTVRDRKIDILVRSQLDERDQISDIDTLIINPDSSQPIALSAVA
EVSLQLGPSAINRISQQRVALVSANLAYGDLSDAVADAQQILAAQVLPTSVQARFGGQNE
EMEHSFQSLKIALILAVFLVYLVMASQFESLLHPLLILVAVPMALAGSVLGLYITQTHLS
VVVFIGLIMLAGIVVNNAIVLVDRINQLRSEGVEKLEAIRVAAKSRLRPIMMTTLTTVLG
LLPMALGLGDGAEVRAPMAITVIFGLSLSTLLTLIVIPVLYAMFDRKKFDHTNIVSTAEQ
DATTLTVETRP
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcatcagcacctctgttaaacggccagtcacggtatggatgttcatgctggcc
attatgttatttggtatggtgggattttcacgcttagcggtcaaactccttcccgattta
agctatcccaccctgacgatccgcaccatgtacgacggcgcggcccccgttgaagttgag
caacttgtctctaaaccgattgaagaagccgtcggcgtggttaaaggtttacgtaaaatc
agctcgatttctcgctcaggcatgtcagatgtggtgctcgagtttgaatggggcaccacc
atggatatggcgagcttagatgtacgtgaaaagctcgatactatcgccctgccgctggat
gtgaaaaagcccctgttgctgcgctttaaccctaaccttgatcctattatgcgcctcgcg
ttgtcggtacctaatgcctctgaagccgagctcaagcagatgcgtacctacgctgaagaa
gagcttaaacgccgtttagaggcactctcaggcgtggctgcggtgcgtttatccggcggt
ttagagcaagaagttcatattcagcttaatcaagaaaaactgtcgcaactcaatttgaac
gcggatgacattaagcgtcgtatcaatgaggaaaacatcaatctctcggcaggtaaagtt
atccagggggatcgcgaatatctggtacgtacccttaatcagttcaattccttagatgaa
ctagggcaagttatcgtctatcgcgatgcacaaaccttagtgcgcctgtttgaagtcgcc
accattaccgatgcctataaagagcgcagcgatatcactcgcattggtagtcaggaatcg
attgaactggctatctataaagaaggcgacgctaacactgtcgcggtcgccaaaaaattg
cgtgatgagctggtgaagatcaacaaagatcctcagcaaaacaaactggaagtgatttac
gatcaatcagaatttattgagagtgccgtcagtgaagtcacctcttcagcgctcatgggc
agtgtgttagccatgctggtgatttatttgttcctacgcaatattatcccgacactgatt
atctctatctcaatccccttctcagtgattgcaacgtttaacatgatgtactttgccgat
atcagcttaaacatcatgtcattaggcggtattgcactggcgattggtctgttggttgac
aacgcgattgtagtactcgaaaacatcgaccgctgccgcagtgaaggtatgagtaaattg
gatgccgcggttacggggactaaggaggttgcaggcgcgattttcgcctcgacgatgaca
acgcttgcggtgtttgttcccttagtatttgtcgatgggattgccggtgccctcttttca
gatcaagctttaacagtgacctttgctctcttggcctccttgctggttgcgttaacctcg
attccaatgctggcctcacgggaaggatttaagatcttgcctgagcttatgaagaaaacc
cccaaggagaaaccaaccactaaacttggtaaattaaaacactatagtgcgaccgtgttt
tccttcccaattgttttgttatttaattacttgccgagtgccttactcacctttgtgtta
attattggccgcttcttctcttggctgcttggtttgataatgcgccctttaagcagtggc
tttaattttgtgtaccatagtactgagtccatctatcacaagctccttgcaatagcgcta
cgtaaacaactcgctaccttactactgacaactgggatcacaggcgcttgtattagcctg
cttcctcgtctgggtatggaattaattccaccgatgaaccaaggggaattctatgttgag
atcttgttacctcctggtaccgccgtgggtgaaaccgataggatactgcagcagctcgcg
ttatcgattaaagacaggcccgaagtcaaacatgcctatagccaagccggtagcggtggt
ttaatgacctcagataccgcccgcggcggtgagaattgggggcgtttacaggtcgagctt
gtggatcacagcgcctatcatcaagtgactcaagtactgcgagataccgctcgacgcatt
ccagcacttgaagccaaaatcgagcaaccagaactctttagctttaaaacgccacttgaa
attgagctaacaggttacgatttagccttactaaaacgcagtgctgacagcttagttaac
gcactttcagcttctgatcgctttgccgatatcaataccagtctgcgtgatggtcagcca
gagctgagcatccgtttcgaccatgctcgtttagcggcattaggtatggatgcccccacg
gttgcaaatcgcattgcacaacgcgttggtggcactgtcgccagtcaatacacggttcgt
gatcgtaagattgatatcctcgttcggagtcaactggatgagcgggaccaaatcagcgat
atcgatactttaatcattaaccctgatagctctcagccgattgctcttagcgcggtggcc
gaagtatcactgcaattaggcccatcggcgataaatcgtatcagccaacaaagggttgcc
ttagtgtcggccaaccttgcctacggcgatttaagtgatgcagtggccgatgcgcagcaa
attctagcggcacaggtgttgccaacatcagttcaagcccgctttggtggtcagaatgaa
gaaatggaacattcattccaatcacttaaaattgcgttgatccttgctgtgttcttagtt
tacttagtgatggcaagccaatttgaatcattgctgcatccattactgattttagtcgcc
gtgccaatggcactcgcgggtagcgttcttggcctatatatcacccaaacccatttgagt
gtggtggtatttattggcctgattatgctcgcggggatagttgtcaataacgccatcgtg
ttagtggataggataaatcagttacgttcagagggcgtggaaaagcttgaagccattaga
gttgcggccaaatcccgtcttcgcccgattatgatgacgaccctcaccacagtattaggt
ctactgcccatggcgttagggctaggcgatggtgctgaagtccgagcaccaatggcgatc
acagttatctttggtctaagcctatcgacgcttttgaccctgattgtgatccctgtgctc
tatgccatgtttgaccgtaaaaagtttgatcatacaaacattgtttctacagcagagcaa
gacgcaacaacgctaactgtggagactcgcccatga
DBGET
integrated database retrieval system
