Shewanella oneidensis: SO_2514
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Entry
SO_2514 CDS
T00099
Symbol
nth
Name
(GenBank) endonuclease III Nth
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
son
Shewanella oneidensis
Pathway
son03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SO_2514 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_2514 (nth)
Enzymes [BR:
son01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SO_2514 (nth)
DNA repair and recombination proteins [BR:
son03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SO_2514 (nth)
Prokaryotic type
SO_2514 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Aldose_epim
HHH_8
HHH_5
ORC6_2nd
Motif
Other DBs
NCBI-ProteinID:
AAN55545
UniProt:
Q8EE75
LinkDB
All DBs
Position
2641736..2642431
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AA seq
231 aa
AA seq
DB search
MNQQKRIQILTRLRENNPKPQTELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
AHSIYALGVEGLKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALESLPGVGRK
TANVVLNTAFGWPTIAVDTHIFRLANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI
LHGRYTCLARKPRCGSCIIEDLCEYKSTLKRRFTPKNKFTDKVLKAKGLTG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacaaaaacgcatccaaatcctcacccgcctacgtgaaaacaatcctaaacca
cagaccgagctgaatttctccagcccttttgaattactggtggcggtaacgttatcggcg
caggcaaccgatgtgagtgtgaataaggcgaccgataaattgtttccggtggccaatact
gcccacagtatttatgccttaggtgtcgaaggattaaaggaatatatcaagacgattggc
ctgtataacaacaaggccgtcaatgtgattaaggcctgcgagatcttgattgaaaaatac
aatggtgaagtgccagaagacagagaagccctcgagtcccttcctggtgttggccgtaaa
actgccaatgtggtgctcaataccgcctttggttggccaactatcgctgtcgatacccat
atctttcgcctcgctaatcgcactaaatttgccccaggtaaaaatgtggtcgaagtcgag
gagcgtatgttaaaggtcgttcccgccgaatttaaagtggatgtacaccactggtttatt
ctgcatggccgctacacctgccttgcacgcaaaccccgctgcggcagctgtattattgaa
gatttgtgtgaatataaaagcactttaaagagaaggtttaccccgaagaataaattcacg
gataaggtgttaaaagctaaagggcttacaggctag
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