Shewanella oneidensis: SO_4214
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Entry
SO_4214 CDS
T00099
Symbol
lpxC
Name
(GenBank) UDP-3-0-acyl N-acetylglucosamine deacetylase LpxC
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
son
Shewanella oneidensis
Pathway
son00540
Lipopolysaccharide biosynthesis
son01100
Metabolic pathways
Module
son_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SO_4214 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
son01005
]
SO_4214 (lpxC)
Enzymes [BR:
son01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SO_4214 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
son01005
]
Lipid A
SO_4214 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AAN57186
UniProt:
Q8E9Q2
LinkDB
All DBs
Position
complement(4387260..4388180)
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AA seq
306 aa
AA seq
DB search
MIFQRTVQKMVKATGVGLHSGNKVTLSIMPAPVNTGIVLVRTDMSPAVAIPAKAEQVRET
TMCTALVNDEGIRISTIEHLFAALAGLGIDNAVIEVDAPEIPIMDGSASPFVFLLQSAGI
KEQSAPKKYLKIKRPVRVEDGDKWAELKPFKGFRVNFKIDFAHPEIARSQQHVVMDFSTS
AFVKDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAILGEFTAYKTGHALNNQLVRALLAQQDAWELVSFEKEADAPVSFTVP
GGVVFA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcaaagaactgttcaaaaaatggtgaaagctaccggagtcggtttgcactct
ggcaataaagtcactttgagcattatgcccgcaccagttaatacagggatcgtactcgtg
cgtaccgatatgagtcctgccgttgctattcctgcaaaggcggaacaagttcgcgaaacc
acgatgtgcacggcacttgtcaatgacgaaggtattcgtatttcgactattgagcatttg
tttgcagccttagcgggtttaggcattgataacgccgtaatcgaggtggacgcccctgaa
atcccaattatggatggtagtgcgagcccatttgtcttcttacttcagtctgcgggtatt
aaagagcagtctgcacctaagaagtacttaaagattaaacgccctgtgcgtgttgaagac
ggtgataagtgggccgagctcaagccttttaaaggttttagagtcaactttaaaattgac
tttgctcaccccgaaattgctcgcagccaacagcatgtggtgatggacttctctacttca
gcttttgttaaagacattagccgcgctcgtacttttggttttatgcgtgatattgagtat
ctgcgtgcgaataacctagcattaggtggcagcatggaaaacgcagttgtacttgatgaa
tatcgcgtcctcaaccccgacggcctgcgttatgaggatgagttcgttaagcacaaaatt
ttagatgcgtttggtgatctctacgtggcaggacacgccattcttggtgagtttactgcc
tataaaacgggtcatgctctgaataaccagttagtacgtgccttattggcgcagcaggat
gcgtgggagttagtgagctttgagaaagaagccgatgctcccgtcagttttactgtgcct
ggcggtgtggttttcgcctaa
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