Sphingobacterium oryzagri: PQ465_06210
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Entry
PQ465_06210 CDS
T10198
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sop Sphingobacterium oryzagri
Pathway
sop01501
beta-Lactam resistance
sop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQ465_06210
01503 Cationic antimicrobial peptide (CAMP) resistance
PQ465_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sop03036
]
PQ465_06210
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sop02000
]
PQ465_06210
01504 Antimicrobial resistance genes [BR:
sop01504
]
PQ465_06210
Chromosome and associated proteins [BR:
sop03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PQ465_06210
Transporters [BR:
sop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PQ465_06210
Antimicrobial resistance genes [BR:
sop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PQ465_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
HH_EMRA
YknX_C
Beta-barrel_RND_2
BSH_CzcB
HH_AAEA_pHBA
Biotin_lipoyl
CzcB_C
HH_YBHG
BSH_YknX
DUF7355
MIX
Motif
Other DBs
NCBI-ProteinID:
WDF69967
UniProt:
A0ABY7WK57
LinkDB
All DBs
Position
complement(1547631..1548776)
Genome browser
AA seq
381 aa
AA seq
DB search
MNKNYLFSALVIGSGLFWQSCGSGDGSSKQQQAAAQGQAAVPVSTTTVEKQIVSGIKSYP
ASVVPLQETQILAEVSGYITKIYVADGASVSKGQPLYEIDRIRYQAAVDQAKANLEIAKT
TLQRLEKDLNRYQTLSEKDAIAKQTLDYAVTDVNNQKAQIQGAQAALTTAETNLKRSVIR
APFAGAVGISQVRTGALVNAGTTLLNTVSSIDPIAVEFQINEREIAEFAAYQSGKSATEI
TVSLPDGSAYSNPGKVAIIDRAVDPATGTIKVRATFNNAQNTLRAGMNLTMNVKSTSTSE
QVIIPFKAVQDQLGVYNVYVVNDSSQAEMRPVKLGLKVSENVVVESGIEAGEKIVVDGLM
NVRPGAKVAENTAAADKAAQK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaactatttattttccgcattagtcataggttcaggattgttctggcagtcc
tgtggatccggcgatggatcatccaaacagcagcaagcagccgcacaaggacaagctgcc
gtaccggtatctaccacaacagtcgaaaaacagattgtttctggaataaaaagttaccca
gcaagtgtagttccattgcaggaaacgcagatattagccgaagtgagcggttatataacc
aaaatatatgtagcagacggagcatccgtatccaaaggacaacctttatatgaaatagac
cgcattcgctaccaagcggccgttgatcaagcgaaagcgaacttggagatcgcaaaaacg
acgcttcaacgcttagagaaagacctgaatagataccaaaccttatctgaaaaagatgcg
attgctaagcaaacgttagattatgctgttacggatgtaaacaatcagaaagcgcaaatt
cagggagcgcaggcagcattaacgacagccgagacgaacctaaaacgttcggttattcgt
gcaccatttgctggcgcagtcggcatatcacaagtgcgtaccggcgcattagtaaatgcc
ggaacaacattattaaacaccgtaagttcgatcgatcctattgcggtagaattccagata
aacgaaagagagattgccgagtttgcggcctatcagtctggaaaatcggcaaccgaaatt
acagtttcgttaccagatggctctgcttacagcaatccgggaaaagtagccatcattgac
cgcgcagtagatccggcaacaggaacaattaaagtgcgcgcgacgttcaacaacgcgcaa
aacaccttgcgcgcaggcatgaacctgacgatgaacgttaagagtacgtcaacgagcgag
caagtgattattccgttcaaagccgttcaggatcagctgggcgtatacaacgtatatgtg
gtaaacgacagcagtcaggcagaaatgcgccctgttaaactgggtttaaaagtgagcgaa
aacgtcgtcgtggaatcgggtattgaagcgggcgaaaaaattgtcgtagacggattgatg
aatgtacgtccgggtgcgaaagtcgccgaaaacacagcggcagccgacaaggccgcacag
aaatag
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integrated database retrieval system
