Sphingobacterium oryzagri: PQ465_19470
Help
Entry
PQ465_19470 CDS
T10198
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sop Sphingobacterium oryzagri
Pathway
sop01501
beta-Lactam resistance
sop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQ465_19470
01503 Cationic antimicrobial peptide (CAMP) resistance
PQ465_19470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sop02000
]
PQ465_19470
01504 Antimicrobial resistance genes [BR:
sop01504
]
PQ465_19470
Transporters [BR:
sop02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PQ465_19470
Antimicrobial resistance genes [BR:
sop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PQ465_19470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
MMPL
SecD_SecF_C
VID
Motif
Other DBs
NCBI-ProteinID:
WDF68461
UniProt:
A0ABY7WFS2
LinkDB
All DBs
Position
complement(4794900..4799465)
Genome browser
AA seq
1521 aa
AA seq
DB search
MFETYIKRPVLSLVISIFITLLGLLALFTLPITQFPDIVPPSVVVTANYTGANAEVSTNA
VAIPLEKAINGVAGMTSMNTVTTNNGTTLIQVSFKVGVDPDIAAVNVQNRVTTVLDELPE
EVIRAGVTTEKEVNSMLMYLNIYTADETADERFIYNFTDINILKELKRIEGVGFAQIMGM
RDYAMRVWLKPDRLAAYQISTDEVVESLRRQNIEAAPGQTGISSDKTVNMQQYVLRYPGK
FSEPEEYANVPIRANADGSIIRVRDVADVEFGSLDYEMVSKTDGRPSASIMLKQLPGSNA
QDVIQRVKDRMEELKGATFPPGMTYTMGYDVSRFLDASISSVVKTLIEAFILVFLVVFIF
LQDFRATIIPILAVPVSLIGALFFMQMMGFSINLLTLFALVLAIGIVVDNGIVVVEAVYA
KMEEEHLPPMEATLAAIKEVGAAVIAITLVMSAVFIPVAFLSGPVGIFYRQFSLTLASAI
VISGINALTLTPALCALILKSPHDKKESNSWLSKFFKKFNSSYDKTAGKYRNLLTKIVGR
RIITIGLLILFFLATWGASSILPSGFIPTEDQGMIYVSVTTPPGATVDRTERVLDEVDNI
ARELESVETVSTLAGYSILTEVSGASYGMGMINLNAWDNRKETVDDMITILREKTAHIAD
AEIDFFPPPTVPGFGNAAGFELRLLDRSGNEDLSETAAVLGKFLKDLAATEVIETASSSF
DVSFPQYMLEIDYDLAAKKGISVENAMNTLQTLMGSFYATNFIRFGQMYKVMVQADPHYR
QTPEDVLNLFLKTKDGEMVPYSAFITMKRVYGPEQITRYNMFTSAMINGQPAPGYSTGQA
IETVQRLAEQLPQGYTIEWSGMTREQVISGDQAIYIFALCLVFVYLLLAAQYESFLLPLP
VILCLPAGVFGSFIFLKIFGLENNIYAQVALVMLIGLLGKNAILIVEYAVLKRKQGMDVI
QAAIEGAFARLRPILMTSFAFVAGLIPLMLASGAGAVGNRTIGTASVGGMVIGTLLGIVI
IPGLYVLVSKRGKKKLGTNVPKIATILLAIGFLASCGMPKKLEKQTATQLPAAFQHDSVA
PVDTLSIATQPWQEVFSDKNLKGLIDTALLYNYDLQQAIKRIEIAQASFKQRKAALLPSL
DAAADAGLRKYGFYTEQGIGNYDTNFSGNLREDEMIPGPAVPDYFIGVRASWELDLWGKL
KSQKYAAFNSLLAENEARRLVETELITNIASAYYELLSLDAKIAVFDNNIALNERALEIT
ILQKEAGRASELGVQQFKAFLSGSFAEREKVKQEIAILENHINYLAGRFNQPVIRDSASF
AKNRLFDKLDVGTPFEMLARRPDIREASFALLGAEQDVKASKAAFLPTIVLSPYMGLQTF
SFSKLVDFDNSLTYGLLGGLTAPLFNQRQLKSQYETYKATYGLSFLEYEKRVLLAYNEVS
NAVNTQEYIQNRERHIQEQVAALKSAVDAANELFVAGRVSYLDIITAQKEAISAEIDEVE
IQKEEVLNEIVIYKALGGGWK
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaacatacataaagcggccggtcctttcgttggtcatttcgatctttattacc
ttgttaggactactagcgctatttacattgcccattacccagtttccagatattgtgccg
ccctctgtggtggttaccgctaattataccggcgccaatgccgaagtgagtaccaatgca
gtggctattccgctagaaaaagccattaacggtgtggcgggtatgacgtctatgaatacc
gtaacaaccaataatggtacaacgttaatccaagtctcctttaaagttggcgtagacccg
gatattgccgcggtaaacgtacaaaacagagtgacgacagtgctggatgaacttcctgaa
gaagtgatacgtgcgggcgtaacgaccgaaaaagaggtgaatagtatgttgatgtatttg
aatatctataccgccgatgagacagcggatgaacgcttcatttacaactttaccgatatc
aatattttaaaagagctgaagcgtattgaaggggtgggctttgcgcagatcatgggcatg
cgcgattacgccatgcgcgtgtggttgaagcctgatcgtctggcagcttatcagatttcg
accgatgaggtcgtcgaatcgttgcgtcgccaaaatatcgaagccgcgcccggccagacg
ggtatcagttcggataaaacggtcaatatgcaacaatatgtattgcgttatccgggaaaa
ttctctgagccggaagaatatgctaatgtgccaattcgggctaatgcggatggttcgatc
atccgtgtccgcgatgtagccgacgtggaatttggttcgttagattacgaaatggtttcc
aaaactgacggtagaccatcagcgtctatcatgttgaagcagttgccgggctcgaatgcg
caggatgttatccagcgggtaaaagatcggatggaagaactgaaaggcgccacttttccg
ccgggcatgacatataccatggggtatgatgtgtcgcgttttttggatgcgtcgatatcc
agtgtggttaagacattgatcgaagcgtttattttggtgtttctagtcgtatttattttc
ctgcaagatttccgggccacgattattcccatcttagcggtgccagtcagtttgattgga
gcgctattttttatgcagatgatgggcttttcgatcaatttgttaacgctgtttgcattg
gtgttggctatcggtatcgttgttgataacggtattgtggtcgtcgaagcagtttatgcc
aagatggaagaagagcatttaccacctatggaagcaaccttggccgcgataaaggaagtt
ggcgcagcggttattgccataaccctagtgatgtcggccgtttttattcccgtcgctttc
ttatccggcccggttggtattttttacaggcaattttcgctgacgctggcctcggctatt
gtgatttcagggattaacgcgttgacgcttacaccggcattatgtgcactgatcttaaaa
tcgccgcatgataagaaggaatccaacagctggctcagtaaattttttaagaagtttaac
tcgtcttacgacaagacggcgggtaaataccgcaacttactgacaaaaattgtgggtcgc
cggataatcacaatcgggctattgattttatttttcttagcgacctggggcgcaagcagc
attctgccttcgggttttatcccgacagaagatcaggggatgatctacgtcagtgtgacc
acgccgcctggcgcgacggtagaccggacagagcgtgtgctcgatgaggtggacaacatt
gcgcgcgaattggagtcggtagaaaccgtttctacgttggccggttatagcatcttaacc
gaagtttcgggggcatcttacggaatgggcatgattaacctgaatgcctgggataaccga
aaggaaacggttgatgatatgatcactattttgcgggagaagacggcacatattgccgat
gccgaaattgatttctttccgccacctaccgttcctggttttggtaatgccgcaggtttt
gaactccgcttattagatcgtagcggtaatgaagatctcagcgaaacggcagccgtgctc
ggtaaatttttaaaagacttagcggcaacggaagtcattgaaaccgcttcatccagcttt
gacgtgagttttccgcaatacatgttggagatagattatgatctcgctgcgaaaaaaggt
atctcggtagaaaatgccatgaatacgttgcaaaccttgatgggaagtttctacgcgaca
aactttattcgttttggacagatgtataaggtgatggtgcaagccgatccgcattatcgt
caaacgccggaagatgtattaaatcttttcttaaaaacaaaggatggcgagatggtgccg
tattccgcgtttattacgatgaagcgcgtttatgggccggagcagatcacgcggtataac
atgtttacttcggccatgatcaacggacagcccgcaccgggttatagcaccgggcaggcc
atcgaaaccgtgcagcgcctggccgaacaattgccgcaaggctacacaatcgagtggtct
ggtatgacgcgtgagcaggtgatctctggcgatcaggcgatttatatttttgcgctttgt
ctggtcttcgtttatctgctgttggccgcacaatacgagagctttttattgccactgccg
gttatcctttgtttaccagcaggtgtttttggctcgtttatattcctgaaaatctttgga
ctggaaaacaatatctatgcacaggtagcactggtgatgttgattggtttgttgggtaaa
aacgcgattttgatcgtggagtatgcggtgttgaaacgtaagcaaggaatggatgtcatc
caggcggctatcgaaggtgcgtttgcaaggcttcgtcctatcctgatgacgtcgtttgcc
tttgttgccggtttgattccgttgatgttagcatctggcgctggcgctgtcggaaaccgt
acgatcgggacagcttccgtaggtggtatggtgatcggtacattgttaggtatcgtgatt
attcccgggctttacgtgttggtttccaagcgcggaaagaaaaaactgggcacgaacgtt
ccaaaaatagcgactatactgttggcaataggttttctagcttcttgtggcatgcccaaa
aaattagaaaaacaaaccgctacacaactgccggcagcttttcagcacgattcggtggcg
cccgtagatacgctttctattgccacacagccgtggcaagaagtgttttcggacaagaat
ctgaaaggtttgattgatacggctttgctgtacaattacgatttgcaacaggccatcaag
cgtattgaaatagcacaagccagtttcaagcaacgaaaggcagcactattgcccagcttg
gatgctgccgctgacgcgggattgcgcaaatatggcttttacaccgaacaggggataggc
aattacgatactaatttttcggggaatctccgagaggacgaaatgattcccgggccggca
gttcccgattattttattggtgttcgtgcttcgtgggagcttgatctgtggggaaaactg
aaaagtcaaaagtatgcggctttcaactccttattggcggagaatgaagcgcgtaggctg
gtcgagacggagctgattaccaatattgcttctgcgtattacgagctgctcagtttggat
gcaaagatcgcggtgtttgataacaatatcgcgttgaatgagcgtgcactggagatcaca
attttacaaaaagaagcaggccgcgcatccgagctgggtgtgcagcagtttaaagccttt
ctttcgggctcctttgccgagcgcgagaaggtaaagcaagaaattgccattttagaaaat
cacatcaattatttggcgggtaggtttaatcagccagttattcgtgattccgcgagcttt
gctaaaaatcgcttgtttgacaagctggatgtcggtacgccttttgaaatgcttgcgcgt
cgaccagacatccgtgaagcttcatttgcattgttgggcgcggagcaagatgtaaaagct
tcaaaagcagctttcttgcccacgatcgtgctctcgccgtatatgggcttgcaaacgttt
agctttagcaagcttgtcgattttgataactcgctaacctatggtttgctgggtggtctt
acagcgccgctttttaatcagcgacaattgaaaagtcagtacgagacatataaagcaacc
tatggtttaagttttttagaatacgagaaaagggttttgctagcgtacaacgaagtgtct
aatgcggtcaatacccaagaatatattcaaaatagagaacgccatattcaagagcaggtg
gcggctttaaaaagcgctgtcgatgcggcgaatgaattgtttgtagcaggtagggtttca
tacctcgatatcattacggcacagaaagaagctatatcggctgaaattgatgaggtagaa
attcagaaagaggaggtgctgaacgagattgttatatacaaagcactggggggtggatgg
aagtaa
DBGET
integrated database retrieval system
