Spirosoma oryzicola: LQ777_03700
Help
Entry
LQ777_03700 CDS
T08981
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
soq
Spirosoma oryzicola
Pathway
soq01501
beta-Lactam resistance
soq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_03700
01503 Cationic antimicrobial peptide (CAMP) resistance
LQ777_03700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soq03036
]
LQ777_03700
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_03700
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_03700
Chromosome and associated proteins [BR:
soq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LQ777_03700
Transporters [BR:
soq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LQ777_03700
Antimicrobial resistance genes [BR:
soq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQ777_03700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
Beta-barrel_YknX
BSH_CzcB
BSH_RND
RND-MFP_C
CzcB_C
BSH_CusB
BSH_YhbJ
Biotin_lipoyl
HH_EMRA
LcnD_C
YlqD
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
UHG92014
LinkDB
All DBs
Position
896438..897493
Genome browser
AA seq
351 aa
AA seq
DB search
MNKTTLIAVVAAVAIVALIGFRLASNKEKIDEQKKPVVNVNTSIPVTVARAEEGAVSQQL
VKTGSLIPFREANITATTAGKVTRVNFNLGTPVRQGQTLVELDNRLKELSLEATKLNIDK
LKKDVTRYNNLLAGNATTEIQVNDTKFNYENAVNQAEQIQKQIQDANVKAPISGQIVQKS
IEPGVYITVGSTLGKVLDVARLKVQVQVNESDVYKLQKGQSVRVTADVFPGKVFTGQISY
IAPQGSEEHNYPVEITIANANGLKAGTFVNVDFSQKSNQKTLQIPRLALVESVKNPYVYV
VDNNVAKQRMIKIGRDFGDSIEVLSGLSAGDVVVTTGQLNLTDGKPVQITK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacaacactaatcgccgtcgtagccgctgtagctattgtcgctctgattggg
ttccggctggcctcgaataaggaaaagattgatgagcagaaaaagccggtcgtcaacgtc
aatacgtcgattccggttacggttgcccgcgcagaagaaggcgccgttagccagcaactg
gtgaagaccggaagcctgattccgttccgggaagcgaacatcacggcgactaccgctggc
aaggtaacgcgcgttaactttaacttgggtacgcccgtccgtcagggccaaacgttggtg
gagctggacaaccggctcaaggaactgtctttggaagcgaccaaactaaacatcgacaag
ctgaaaaaagacgttacccgctataacaacctgctggctggtaatgcaaccaccgaaatt
caggtgaacgataccaagttcaactacgaaaatgcggtcaatcaggcggagcagatccag
aagcagattcaggatgcaaacgtaaaagcaccgatcagcggccagatcgttcagaaaagc
atcgaacccggcgtgtacattacggtaggtagcacactcggcaaggtcctggatgtagcc
cgcttaaaagtacaggtacaggtcaacgaaagcgacgtgtataagctgcaaaaaggacag
tcggtacgcgttaccgccgatgtatttcctggcaaagtgtttaccggtcagatttcatac
atcgctccgcagggtagcgaagaacataactaccccgttgagatcacgattgccaatgcc
aacggtctgaaagccggtacgttcgtgaacgtggacttttcgcagaaatcaaaccagaaa
acgttgcagattccgcgtctggctttggttgaaagcgttaagaatccgtacgtgtacgtc
gtagataacaatgtagccaaacaacgcatgatcaagatcggtcgggactttggcgacagc
atcgaagtactgagcggcctgtcggctggcgacgtggttgtaaccaccggccaactgaac
ctgaccgacggaaaacctgtgcagataaccaaatag
DBGET
integrated database retrieval system
