Spirosoma oryzicola: LQ777_17320
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Entry
LQ777_17320 CDS
T08981
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00020
Citrate cycle (TCA cycle)
soq00785
Lipoic acid metabolism
soq01100
Metabolic pathways
soq01110
Biosynthesis of secondary metabolites
soq01120
Microbial metabolism in diverse environments
soq01200
Carbon metabolism
soq01210
2-Oxocarboxylic acid metabolism
Module
soq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
soq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LQ777_17320
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LQ777_17320
Enzymes [BR:
soq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LQ777_17320
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
UHG90003
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All DBs
Position
complement(4089971..4092751)
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AA seq
926 aa
AA seq
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MDQYSYIANSDAAYVDQLYQSYKQDPQSVDESWQQFFKGFEFSLTYGENAKGTNGKTNGA
STNGNGAAQAGASTKPVDASHAEKEVSVASLIKAYRSRGHLLAKTNPLKERKDRQPRVDL
PDYALSEADLDTVFESGKLLGIGPATLRVIMESLRKVYAGDIGFEYMFIRELDVKNWLRN
KIEKEALVFTPSNDEKKRIFEKLNEATVFENFLATKYLGQKRFSLEGGEVTIPALDTIIS
QAADMGVEEVMIGMAHRGRLNVLANILGKSYESIFDGFEGNVPEQVHGDGDVKYHLGYSS
LIETKSGKQISVKLAPNPSHLEAVNPVVEGFVRAQADEEYNGDFRKIMPILIHGDAAVAG
QGIVYEVTQMAKLPGYQTGGTVHFVINNQIGFTTDFDDARSSIYCSDIAKIIDAPVFHVN
GDNPEAVIFCAKLAVEFREKFNRDVFIDMVCYRRYGHNESDEPKFTQPTMYNIIDKHANP
RELYKDLLIERGDVDAELAQRMDTEFKQQLQDRLDRVKQKAEIPYKPLRLDLDWAELRFS
EPADFDQSPETGVSPEVLSEVGKALVKIPEGFKPLKQIDKLLKDRQTMLNDTKMVNWGTA
ELLAYGSLLLDGKPVRLSGQDVQRGTFSHRHAVLHDSETNQSYSSLDFIRDGQQKFQIYN
SLLSEYGVLGFEYGYAMANPHALVIWEAQFGDFSNGAQLIIDQFIAAAESKWGIENGVTL
LLPHGYEGQGPEHSNARPERYLQLYAEYNMVVANISTPANFFHLLRRQLAWPFRKPLVVM
SPKSLLRHPKCVSPLEELTKGSFQEVLDDNYAQAEKVKRVLLCTGKVYYDLLDKQQADQR
DDVAIVRLEQLAPLPKKQLDAILEQYKSAEVFWVQEEPENMGYWTYLLRVGMNLPIISRK
AAASPATGYPKIHTQEQADIVRRAFE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtattcatatatcgctaattccgacgcggcttacgtagaccaactgtatcag
tcttataaacaagaccctcaatcagttgacgaaagctggcaacaatttttcaaaggattc
gaattttcattgacctacggcgaaaatgccaaaggaaccaatggtaaaaccaacggcgct
tcgaccaacggtaatggggctgctcaagctggcgcttcgacaaaaccggttgatgcaagt
catgccgaaaaagaagtttcggttgccagtctgatcaaagcctaccggtctcgcggtcac
ctgttagccaaaaccaacccgctcaaagagcgcaaagaccgtcagccacgggtcgatctg
cccgattacgccttgtcggaagcagacctggatacggtattcgagtcaggtaaattgctt
ggcattggacccgctactttacgggtcatcatggaatcgcttcggaaggtatatgccggt
gatatcggtttcgaatacatgtttatccgtgagctggacgttaaaaactggctacggaac
aaaatcgaaaaagaagcgctggtctttacgccatcaaacgacgagaagaagcgtattttc
gagaagttgaatgaagcgaccgtcttcgagaactttctggcaacgaaatacctcggacag
aagcgcttttcgctggagggaggggaagtgaccattccggcgttggataccatcatcagt
caagccgccgatatgggcgtggaagaagtgatgatcggtatggcgcaccgcggacggctg
aacgtgctggccaatatcctgggtaaatcctacgaatcgatctttgacggtttcgaagga
aacgtgcctgagcaggttcacggcgacggcgacgtaaaataccacttgggttattcaagc
ctgatcgaaaccaaatcgggtaaacagatcagcgtaaaacttgcaccgaacccgtcacac
ctggaggctgtaaaccccgtagttgaaggatttgtgcgggcgcaggccgacgaagaatac
aatggtgacttcagaaagatcatgccaatcctgattcacggcgacgctgcggtggcaggg
caggggatcgtctatgaagttacgcaaatggctaagctgccgggttaccaaaccggtggt
acggttcactttgtcattaataaccagattggctttacaaccgacttcgatgatgctcgg
tcatcgatctattgctcggacattgccaagattatcgacgcaccggttttccacgtaaat
ggcgataatccggaagcggttattttctgcgctaaactagcggttgagttccgtgagaaa
ttcaatcgggacgtgttcatcgacatggtttgctaccgtcggtatggccataacgaatca
gatgaacccaagtttacgcagccgacgatgtacaacatcatcgataagcacgccaaccca
cgcgaactgtacaaagacctgctgattgagcggggcgacgtagacgctgaactggcgcaa
cgcatggataccgaattcaagcagcagttgcaggatcggctcgaccgcgtgaagcaaaaa
gctgagattccgtacaaaccactgcggctcgacctcgactgggcagaactgcgtttcagc
gaacccgctgattttgatcagtcgcccgaaacgggtgtttcgcctgaagtgctgtcggaa
gttggtaaagcgctcgtcaaaattccggaagggttcaagccgcttaagcaaattgataaa
ctgctgaaagatcggcagacgatgctcaatgacaccaaaatggtgaactggggcaccgcc
gaactgctggcttacgggtcgctgttgctggatggtaaacccgttcgactgagcggtcag
gatgtgcagcggggtacattctcgcaccgtcatgcagtattacacgattcggaaacgaac
cagtcgtattcatcgcttgattttatccgggacggtcaacagaaattccagatctacaac
tcactgctgtcggaatacggcgtactgggttttgaatatggttatgccatggcgaacccg
cacgcgctggttatctgggaagcgcagttcggggatttctcgaacggtgctcagttgatc
atcgaccagtttatcgcagctgctgaatcgaagtggggcattgagaacggtgtaacgttg
ctcttgccacacggttacgaaggacagggacctgaacactcgaacgcccggcctgaacgt
tatcttcagctctatgcggagtacaacatggtcgttgccaatatttcaacaccagccaac
ttcttccacctgctgcgtcggcaactggcttggccgttccgtaagccactggtggtgatg
tcgcctaagtcgttgctgcgtcatccaaaatgtgtttccccgctggaagagttgaccaaa
ggaagcttccaggaggtgctcgatgataactatgcacaggccgaaaaagtaaaacgagtg
ctgttatgtaccggtaaagtctactatgatctgctcgataagcaacaggccgatcagcgt
gacgacgtagcgattgttcgactcgagcaactggctccgctgcctaaaaagcaactggac
gctattttggagcagtataaatccgctgaagtgttctgggtacaggaagaacccgaaaac
atgggctactggacttacctgctgcgggtagggatgaatctacccatcatctcgcgtaag
gctgcggcttcaccggctacgggttatcccaaaatacacacgcaggaacaagccgatatc
gttcggagagcttttgaataa
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