Spirosoma oryzicola: LQ777_22650
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Entry
LQ777_22650 CDS
T08981
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
soq
Spirosoma oryzicola
Pathway
soq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ777_22650 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_22650 (nth)
Enzymes [BR:
soq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LQ777_22650 (nth)
DNA repair and recombination proteins [BR:
soq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQ777_22650 (nth)
Prokaryotic type
LQ777_22650 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_2
HHH_3
HHH_8
Transposase_20
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
UHG91029
LinkDB
All DBs
Position
5377718..5378383
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AA seq
221 aa
AA seq
DB search
MQKKERFQRFLDYFTQHYPEPKTELNFGNPYELLVAVILSAQCTDKRINQVTPALFARFP
EAESLAAASVDEVFSYIRSVSYPNNKAKHLVGMAKLLMERFGGEIPATVEELQTLPGVGR
KTAHVILSIVYNEPTMAVDTHVFRVSHRLGLAPLTATTPLAVEKALMAHIPKQYVPKAHH
WLILHGRYICLARTPKCPACDLRDFCKYYEKHPELGHSGLK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaagaacgcttccagcgatttctcgattatttcactcagcattatccagag
cctaaaacagaattaaacttcggcaatccatacgagttgctggtcgcggttattttgtcg
gctcagtgtacagataagcggatcaaccaggttacacctgccctgtttgctcgttttcca
gaagcggaatcattggcggcagcgtcggttgacgaagttttttcgtacatccgtagtgtg
tcctacccgaacaacaaggccaagcacctcgttggaatggcgaagttgctgatggagcgc
tttggcggagaaattccggcgacggttgaagagttacagacgctgccgggtgtaggccgg
aaaacagcacacgtcatcttgtcgattgtgtacaacgaacccacgatggccgttgatacg
cacgtgtttcgcgtttcgcatcggttgggactcgctccattgaccgcgacgactccgctt
gccgttgagaaagcactgatggctcatattccgaagcagtacgtccccaaggctcaccac
tggcttatcttacacgggaggtacatttgtctggcacggacgcccaaatgcccggcatgc
gacctacgcgatttttgcaagtactacgaaaagcaccccgagttaggtcattcaggatta
aaatga
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