Spirosoma oryzicola: LQ777_24145
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Entry
LQ777_24145 CDS
T08981
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
soq
Spirosoma oryzicola
Pathway
soq01501
beta-Lactam resistance
soq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_24145
01503 Cationic antimicrobial peptide (CAMP) resistance
LQ777_24145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soq03036
]
LQ777_24145
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_24145
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_24145
Chromosome and associated proteins [BR:
soq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LQ777_24145
Transporters [BR:
soq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LQ777_24145
Antimicrobial resistance genes [BR:
soq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQ777_24145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UHG93863
LinkDB
All DBs
Position
unnamed1:4397..5479
Genome browser
AA seq
360 aa
AA seq
DB search
MKRILVLLSVCALFGTISCSHKEEEKEEEKEYSVTSPLLRDTTITNNYVCQIRSIQHIEL
RALEKGYLQKIFVDEGQYVKKGQLMFQILPVQYQAELQKAEAEANFANVEFRNTKQLADS
NIVSKNELALSKAKLDKAKAEVSLAQVHLGFTEVRAPFDGIMDHFQVRLGSLVDEGDLLT
TLSDNSKMWVYFNVPEAEYLNYKTHAQQENLNSVNLLMANQQLFKYPGVVQTVEADFNNE
TGNIAFRATFPNPNSLLRHGETGNIQMTLPMKNAMIIPQKATFEVLEKKYVYVITKDNKI
QSREITIAAEMPHIFVVGSGLKKDDKILLEGLRQVKENEKIAYKYQQPASVIANLGLYAE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcctcgttctcctaagcgtatgtgccttgtttggtaccataagctgttcg
cacaaagaagaagaaaaggaagaagaaaaggaatattcggtcacgagtcctctgctaaga
gacacgacgatcacgaataactatgtctgtcaaattcgctccatccagcacatcgaatta
cgggcgctggaaaaagggtatctgcaaaagatttttgtagacgaaggacagtacgtcaag
aaaggtcagttgatgtttcaaatcctgccggtgcaataccaagcggagctacagaaagct
gaagccgaagccaattttgccaatgttgaattcagaaacacaaagcaactcgccgatagc
aacattgtctcaaaaaatgaattggctctatcaaaagctaaattagacaaagcaaaagcg
gaagtgtctctggcacaagttcacttaggtttcacggaagtaagagcaccgttcgatggg
atcatggaccacttccaggtacgattgggtagtctggttgacgagggtgacctgttaacc
acgctttcggacaacagcaaaatgtgggtctatttcaatgtgccggaagcggagtacctg
aactacaaaacccacgctcagcaggaaaatctgaatagtgtaaacctgctgatggcgaac
caacagctttttaaatacccaggcgtagtacaaacggttgaggctgacttcaacaacgaa
accggtaacatcgcgttccgggctaccttcccgaaccccaatagcttactgagacatggc
gaaactggcaacattcaaatgactttgccgatgaagaatgccatgattattccgcagaaa
gccactttcgaagtactggagaagaagtatgtgtacgtgatcaccaaggacaacaagatt
cagtcgcgagaaatcacgatagccgccgaaatgccacacatcttcgttgttgggtctggt
ctgaaaaaagacgacaagatcctgttggaaggattacgtcaggtgaaagagaatgaaaaa
attgcctataaataccagcagcccgcttctgtcatcgccaatctggggctgtacgccgag
taa
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