Spirosoma oryzicola: LQ777_27635
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Entry
LQ777_27635 CDS
T08981
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
soq
Spirosoma oryzicola
Pathway
soq01501
beta-Lactam resistance
soq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_27635
01503 Cationic antimicrobial peptide (CAMP) resistance
LQ777_27635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soq03036
]
LQ777_27635
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_27635
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_27635
Chromosome and associated proteins [BR:
soq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LQ777_27635
Transporters [BR:
soq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LQ777_27635
Antimicrobial resistance genes [BR:
soq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQ777_27635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
BSH_RND
Biotin_lipoyl
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
UHG94359
LinkDB
All DBs
Position
unnamed4:complement(139242..140369)
Genome browser
AA seq
375 aa
AA seq
DB search
MKPRTIHTSLFLLLMMSLMACSHDEENEKKEESAALPPTYTLATVRAVNNSRDLTLPADL
KPYYATRIFPKVKSFVQKVAVDRGSRVRKGQLLAVLEAPELTAQLAEAQTKITLANSSLT
NDKALLNRLLKASQTAGVVAASEIDLARSRVAADSSLLAAAQANVKVARQMTTYLRLVAP
FDGTITERNVSAGDLVGPDGNTANAVPLFVLEDNSRLRLTLAVPELYADAVRDAVGITFS
VPALPGQTFTAKLARTSESLQENVRALITEFDVPNANRKLSAGMYADVTLPLHRRVATLV
VPATAVVNSTEQVFVVAVRDGKAHRVSVRKGLDLGEETEVFGSLRVGDQVVLAASDETQD
GDIIKAGSALSAHVK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacgcaccatacatacgagtctctttctgctgcttatgatgagcctgatggct
tgttcacacgatgaagagaacgagaaaaaggaggaatcagccgcgctgccgccaacctac
acgctggcaaccgttcgggctgtgaacaactcccgcgacctgacgctacccgccgatttg
aagccgtattacgcaacccgcatcttccccaaagtgaaaagctttgtgcagaaggtggct
gtcgatcggggttcgcgggtgcggaaagggcagttgctggccgttctggaagcccccgaa
ctgacggctcaactggccgaagcgcaaacaaaaattacgctggccaacagctccctcacc
aatgataaggcgctcctgaaccgcttgttaaaagcgtcgcaaacggcgggagtggtggcg
gcctctgaaattgatctggcccggagtcgggtagccgccgacagttcgctactggcggct
gcccaggcaaacgtgaaggttgcccgtcagatgacaacgtacctgcgcctggtcgctccg
ttcgatggcaccatcaccgagcgtaacgtatcggcgggggatctggtcggacccgacggc
aataccgccaacgccgtgccgctttttgtgctggaagacaacagccggttgcgtcttacc
ctggcggtgccggaattatacgccgatgccgtacgggatgctgtgggaatcaccttttcg
gtgcccgcgctgccggggcagacattcacggccaaactggcccgaacgtcggaaagccta
caggaaaacgtccgggcgctgattacggaatttgacgtgccaaacgcaaaccggaagctc
agcgcgggtatgtacgccgacgttacgttgccgctacaccgccgggtggctacgctggtt
gtgcccgcaacggctgtcgtcaattcaaccgaacaggtatttgtggtcgctgtccgcgat
gggaaagcccaccgggtaagcgtgcggaaagggctggatctgggcgaagaaactgaagta
ttcggctcgctccgggtgggcgatcaggtcgtgctggccgcttccgacgaaacgcaggat
ggcgacatcatcaaggccggttcggcgctatcggcccatgtcaagtaa
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