KEGG   Solanum tuberosum (potato): 102583049
Entry
102583049         CDS       T02981                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03420  Nucleotide excision repair
sot04120  Ubiquitin mediated proteolysis
sot04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102583049
   04120 Ubiquitin mediated proteolysis
    102583049
  09124 Replication and repair
   03420 Nucleotide excision repair
    102583049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102583049
   03400 DNA repair and recombination proteins [BR:sot03400]
    102583049
Enzymes [BR:sot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     102583049
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   102583049
  Multi subunit type E3
   SCF complex
    Ring finger protein
     102583049
   Cul2 complex
     102583049
   Cul3 complex
     102583049
   Cul4 complex
     102583049
   Cul7 complex
     102583049
   Cul8 complex
     102583049
   Cul9 complex
     102583049
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102583049
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102583049
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 102583049
NCBI-ProteinID: XP_006345265
UniProt: A0ABQ7W2S2
LinkDB
Position
Un
AA seq 116 aa
MASPDTDVPMVPAGESSTGAGTSNKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcgtcaccggataccgatgtgccgatggttcccgccggcgagagttcaaccggagct
ggaacgtctaacaaaaagccgaagcgatttgagatcaaaaagtggaacgctgtttctctc
tgggcttgggatattgtggtagataattgtgccatctgtaggaatcacatcatggatctg
tgtatcgagtgtcaagctaatcaagctagcgcaacaagtgaggaatgcacggttgcttgg
ggtgtttgcaaccatgcattccacttccattgcattagtaggtggctcaagactcgtcaa
gtgtgtccacttgataacagcgagtgggagtttcagaagtacggtcactag

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