Solanum tuberosum (potato): 102586115
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Entry
102586115 CDS
T02981
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102586115
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
102586115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
Tfb2_C
Zn_ribbon_4
Motif
Other DBs
NCBI-GeneID:
102586115
NCBI-ProteinID:
XP_006342401
LinkDB
All DBs
Position
Un
AA seq
660 aa
AA seq
DB search
MNDVGKGGDHVLMWQIWEEENNRWMEENHTLYLDFNSQNEFMSETAEQPSDLIIPLLRYQ
KEWLTWALKQEESTARGGILADDMGMGKTVQAMAFVLAKREIGQAISNSTVKGTLVICPV
VALIQWVNEIDRFTTIGSNKVLVYHGANREKDINRFAEYDFVITTYSTVETEYRKNIMIL
HSMKWNRIILDEAHCVKDIRSNTTRAILALESSFKWALSGTPLQNRVGELYSLVRFLQIN
PYSYYFCKDCDCRALNNSSFMCPHCHHKSTRHFCWWNRYIASPIQFQGNHGIGRDAMVLL
KHKILKTIMLRRTKKGRAADLALPPRIVTLRKDSLDANEEDYYTSLREESRAKFNAYIQD
GTLMNNYADIFDLLTRMRQALDHPYLVEYSSTVVDRSGSTNNVGYVEQSCGLCHDLVEDL
VVTSCTHVFCKSCLISFSAVMGQISCPSCSKSFTVDFTANDQKTKANIKGFRSSSILSKI
RLDNFQTSTKIEALREEIRFMIERDGSTKAIVFSQFTSFLDLIHYSLQKSGISCVQLDGS
MTITARDSAITKFTNDPDCIIFLMSLKAGGLALNLTVASQVFLMDPWWNAVVERQAQDRI
HRIGQYKPIRIVRFVIENTIEERILELQEKKKLLFEGTVGGASEALGKLTEADLKFLFAT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtaggaaagggtggtgaccatgtattgatgtggcaaatatgggaagaagag
aacaataggtggatggaagaaaaccatacactttatctggacttcaatagtcaaaatgag
tttatgagtgaaactgctgagcaaccatctgatttgatcattcccttgctgaggtaccag
aaagagtggttgacttgggcgttgaagcaagaagaatcaacagctagaggtggtatcctt
gctgatgatatggggatggggaagactgttcaagccatggcttttgtgcttgctaaacgc
gaaatagggcaagcaatttctaattctacagtgaaaggaacccttgttatatgtcctgtt
gttgctttgattcaatgggtcaatgagattgaccgctttaccactataggaagcaacaaa
gttcttgtttaccatggtgccaacagggagaaagatatcaacagattcgcagagtatgat
tttgttatcactacctactccacagtggagactgagtataggaaaaatatcatgattttg
cactctatgaagtggaatcgtattattctggatgaggcccattgtgtaaaagatatacgc
agcaacactacaagagctattcttgcactagaatcttcttttaagtgggccttaagtggt
actcccctccagaaccgtgtaggagagttgtactcactcgtccgttttttgcaaattaat
ccttactcgtactacttttgtaaagattgtgactgcagagctctcaacaatagctcattc
atgtgcccacattgccaccacaaatctactcggcacttttgctggtggaatagatatatt
gcctcacccatacaatttcaaggaaatcatgggattggtagagatgcgatggttttattg
aaacacaaaattttaaaaacgataatgctaaggcgtactaaaaagggaagggctgctgat
cttgcacttcctccaaggattgttaccttgcgcaaagattctttggatgctaacgaagaa
gactactacacatcattgcgcgaagaaagtcgggcaaaatttaatgcatacattcaagat
ggtacgttgatgaataactatgctgacatttttgatctactcacacgcatgcggcaggca
cttgatcatccttaccttgtggaatactcaagtactgttgtggatagaagtggaagcaca
aataatgttggttatgttgaacaatcatgtggtttatgtcacgatctagtagaagatcta
gttgttacttcttgcacacatgtcttttgcaagtcatgtctgataagtttttctgcagtt
atgggacaaatttcatgtccgtcatgttctaaatcatttacagtggatttcaccgcaaat
gatcagaaaactaaagcaaatatcaaagggtttaggtcttcaagtatactgagcaaaatt
cgtcttgataattttcagacaagcacaaaaatagaagctttgagagaagaaataaggttc
atgattgaaagagatggttctacaaaggcaattgttttcagccaattcacatcatttttg
gatctgatacactattcgctacaaaagtcgggcatcagttgtgttcaattagatggatcc
atgactatcactgcaagagattctgcaattacaaaatttacaaacgatccagattgcatt
atatttcttatgagcttgaaagccggaggtcttgccctgaatcttacagtagcatcacaa
gttttcttgatggatccttggtggaatgctgtcgtggagaggcaagcccaagatagaatc
catcgaataggacagtataagccaatcaggattgtgagatttgtgattgagaatacaatc
gaggagaggatcttagagttgcaagagaagaagaaattactttttgaagggacggtgggt
ggtgcttctgaggccttggggaaactaacagaggcagacttgaagttcttgtttgcaacc
tag
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