Solanum tuberosum (potato): 102590390
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Entry
102590390 CDS
T02981
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102590390
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
102590390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_5
zf-C3HC4
DEAD
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
102590390
NCBI-ProteinID:
XP_015159086
LinkDB
All DBs
Position
Un
AA seq
728 aa
AA seq
DB search
MKKTRKILHVTLGNHSIFLSILHYLSMLYDGHRTPYSLLLLFSSWLLKVEVFNLIRIGKI
KSSSPCLYLFQWRIFIFLCGYEQAGTLTIFTFSHFCYDRMPTEDQMDEDTDSDRRYRGML
QRITMRKYERERIQKRRGLILTWEILEQEMDEFLLENYSDDLDLEIHNVSFAETAEAPSD
LILPLLRYQKEWLAWSLKQETIFKGGILADEMGMGKTVEAIALVLAQCELKKATSGSSIL
SSSLGTSQELPTVKGTPVVCPLIGEMEWVRKIERCTTKGSNKTLFYHGTNREKCMFKLEE
YDFVITTYSTIQADYKPKKTKKNCSVGEDVSKRKSVLHSVKWERIILDEASHTFIDSCIN
FFFSDVCPQCSHQPARHFLWWKKYIEKPLKSYDNEGTDALVWLKYKILKSLLLRRTKKER
AVDLALPTKTAIVRKDSLYDREYDYYKTLYNRSRAQFDIYVQLGILTNYFGHILAIITRL
RQVTCCRHVFCKACAIYLSESVRKTPCPSCTKPLTFDFTGNKDKGDSSSKPTVKGFRSSS
ILNIIQLDKFKTSTKIEALREEISDMVERDGSAKGIVFSHFTSFLDLIQYSLNLLTGINC
VQLVGSMSIATRDAAIKRFTEDANCKILLMSLKAGGVALNLTVASHVFLTDPWWNPTVEQ
QAQDRIHRIGQYKPVKIVRFVMENTIEERILELQEKKKLLFEGTVGGSSEALGKLTTEDL
KSLFYHHF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgagaaaaatactccatgttactttaggaaaccattctatctttttaagt
attttgcattacttaagcatgctctatgatggtcatagaacaccttattctctcttgctc
ttattttcttcatggttgttaaaagtagaggtttttaaccttattaggattggcaagata
aagtctagctccccttgcttgtacttattccaatggaggatttttatatttttgtgcgga
tatgaacaggctggaactctgactattttcacattttcacatttttgctatgatcgcatg
cctacggaagatcaaatggatgaagatacggattcagatcgtagataccgtggcatgttg
caaaggataacaatgaggaaatatgaacgtgagaggatacaaaagagaagaggattaatt
ttgacatgggagatacttgaacaagaaatggatgaattccttctggagaattattcagat
gatttagacttggaaattcataacgtttcgtttgctgaaactgctgaggcaccatcagat
ttgatcttgccactattgaggtaccaaaaggagtggttggcttggtcattaaagcaagaa
actatattcaaagggggtattcttgctgatgaaatgggaatggggaagacggttgaagcc
atagcacttgtgcttgctcaatgcgaattaaagaaagcaactagtggttccagtatattg
tcgtcttcactcggtacttcccaggaactcccaacagtaaaaggaactcctgttgtatgt
cctctgattggagaaatggaatgggttcgcaagattgaacgttgcaccactaaaggaagc
aacaaaactcttttttatcatggcaccaatagggagaaatgtatgttcaaactggaggag
tatgattttgtcattactacgtactccactatccaggctgactataagccaaaaaagaca
aagaagaactgcagtgttggtgaagatgtgtccaagaggaagtcagttctgcattcagtg
aagtgggaacgtatcattttggatgaggcaagtcatacattcatagattcatgcattaac
tttttcttctccgatgtgtgcccacagtgctcccaccaacctgcacgtcacttcctctgg
tggaagaaatatattgaaaaaccattaaagtcatacgataatgaaggtacagatgcgttg
gtgtggttgaagtacaaaattctgaaaagtctattgctaagacgtaccaaaaaagaaaga
gctgttgatcttgcacttcccacaaagactgctattgtgagaaaagattctttgtatgat
agagaatacgactactacaagacattgtacaatagaagccgggcacagttcgatatatat
gtccagcttggaattctgactaattactttggtcacattttggctataatcacacgccta
cgtcaggttacttgttgcaggcacgtgttttgcaaggcctgtgcgatatatttatctgaa
agtgtgaggaaaacgccatgcccttcatgtaccaaacccctcacatttgacttcactgga
aataaagataagggagattctagttctaaacctactgtcaaagggtttaggtcctcaagt
atattgaacataattcagcttgataaattcaagacaagcactaaaatagaagcattgagg
gaagaaattagtgacatggttgaaagggacggttctgcaaaaggaatagtttttagccat
ttcacatcgtttttggacctgatacagtattctcttaatttgctgacgggcatcaattgt
gttcaattagttggatccatgtctattgccacaagagatgctgcaattaaaagattcact
gaggatgcaaattgcaagatattgcttatgagcttgaaagcaggaggtgttgctctcaat
cttacagttgcatcacatgttttcttaacggatccttggtggaatcctacggtggagcag
caagcccaagatagaattcatcgaatagggcaatataaaccagtcaagattgtgagattt
gtgatggagaatacaattgaagagagaatcttagagttacaagagaagaagaaattactt
tttgaagggacagttggtggttcttcagaggccttaggaaaattaacaaccgaggacttg
aaatccctgttttatcatcacttttga
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