Solanum tuberosum (potato): 102593550
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Entry
102593550 CDS
T02981
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102593550
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
102593550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
102593550
NCBI-ProteinID:
XP_015159084
LinkDB
All DBs
Position
Un
AA seq
375 aa
AA seq
DB search
MEYQKEWLAWSLKQETIFKGGILADEMGMGKTVQAIALVLAQRELKKATSDSSILSSSLG
TSQELPTVKGTLVVCPLIGALQLIREIERCTIKGSNKTLLYHGADREKCKYKQEEYDFFI
TTYSTIQADYRPKRKKQNSSVGEDVSRRKSVLHSVKWDRIILDEASHTFIDSCIKFFVFV
TWHFQAHCIKSVHSNSTKAVLALESFYMWAALTGTPLQNHIGELYAVVRFLQVTPYVCYF
CENCNCTGLDFSFSNACPQCSHQPASHFLWWKKYIEEPSWSYDDEGRDVMVWLKHKILKS
LLLRRTKKERAVDLALPTKTVTVRKHSLDDREYDYYKTLCRRSQAQLDIFVQDGNVINKH
GHIFVMITRLRQVIL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggagtaccaaaaggagtggctggcttggtcattaaagcaagaaactatattcaaaggg
ggtattcttgctgatgaaatgggtatggggaagacggttcaagccatagcacttgttctt
gctcaacgcgaattaaagaaagcaactagtgattccagtatattgtcgtcttcactcggt
acttcccaggagctcccaacagtaaaaggaactcttgttgtgtgtcctttgattggagca
ttgcaattgattcgtgagattgaacgttgcaccattaaaggaagcaacaaaactcttctt
tatcatggcgccgatagggagaaatgtaagtacaaacaggaggaatatgattttttcatt
actacatactccactatccaggctgactataggccaaaaaggaaaaagcagaacagcagt
gttggtgaagatgtgtccaggaggaagtcagttctgcattcagtgaagtgggatcgtatc
attttggatgaggcaagtcatacattcatagattcatgcattaagttttttgtttttgta
acttggcatttccaagctcattgtatcaaatctgtacacagcaactccacaaaagcggtt
cttgctttagaatctttttatatgtgggcggccttaactggtacacccctgcaaaaccac
attggagaattgtacgcagttgttcgtttcttacaagttaccccttatgtttgttacttt
tgcgaaaattgtaattgcactggacttgattttagcttctccaatgcatgcccacagtgc
tcccaccaacctgcaagccacttcctctggtggaagaaatatattgaagaaccttcatgg
tcatacgatgatgaaggtagagatgtgatggtgtggttgaagcacaaaattctgaaaagc
ctattgctaagacgtaccaaaaaagagagagctgttgatcttgcacttcccacaaagact
gttacagtgagaaaacattctttggatgatagagaatacgactactacaagacactgtgc
cgtagaagccaagcacagctcgatatatttgtccaggatggaaatgtgattaataagcat
ggtcacatatttgtaatgatcacacgcctacggcaggtcattttatag
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