Solanum tuberosum (potato): 102594788
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Entry
102594788 CDS
T02981
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102594788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102594788
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102594788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
NACHT
AAA_28
AAA
AAA_24
AAA_23
Arf
PduV-EutP
AAA_18
AAA_14
G-alpha
AAA_7
AAA_15
AAA_30
SRP54
AAA_22
AAA_5
FtsK_SpoIIIE
AAA_13
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
102594788
NCBI-ProteinID:
XP_006351662
UniProt:
M1ANL1
LinkDB
All DBs
Position
Un
AA seq
286 aa
AA seq
DB search
MEGESSSIQVNGMQFSYDFQSPIYFDFNLNIAPRSRCLLLGANGSGKTTLLKILAGKHMV
GGKDVVRVLNFSAFHDTHLVCSGDLAYLGESWSKNVGAVGEIPLQGDFSAEHMIFGVEGV
DPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVARMD
LLDFFKEECEQRGATIVYATHIFDGLETWATDLVYIQEGVLKRTEKLPELPELKSSPNLL
SVVENWLRSETPIEKKKPAPSPPKAQKSSPFGSSPFQSSRHMAYFR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaatcaagcagtattcaagtcaatggaatgcaattctcatatgattttcaa
agtcccatctatttcgatttcaatctcaacattgcccccagatctcgctgtctccttctc
ggtgcaaatggatcagggaaaacaacccttttgaagatattggcgggaaaacatatggtc
ggtggaaaagatgtagtcagggtgctgaatttttcggcttttcatgatacccaccttgtt
tgtagtggtgatctggcttaccttggagagtcttggagcaaaaatgttggtgctgttgga
gagattccacttcagggagatttttcagctgaacatatgatatttggagttgaaggagtg
gatccagttcgacgagaaaagttgattgagctgctggatattgatctgcagtggcgtatg
cacaaggtatctgatggtcagaggcgtagagttcaaatctgcatgggtctccttcacccc
tataaggttcttttactggatgaggtcaccgttgacttagatgttgttgcgaggatggat
ttattggatttctttaaggaagaatgtgaacagagaggagctacaattgtctatgcaacg
catatatttgatggactggagacatgggcgactgatcttgtttacatccaagaaggagtt
ctgaagaggactgagaaattacccgagcttcctgagttgaagtcctcccctaatttgctt
tcggtagttgagaactggttgcgttctgagaccccgattgagaaaaagaaaccggctccc
tctccaccaaaagctcaaaagtcctctccttttggctcttctccctttcagtcatctaga
catatggcatattttcgctga
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