KEGG   Solanum tuberosum (potato): 102598459
Entry
102598459         CDS       T02981                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sot03400]
    102598459
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      102598459
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 DEAD zf-RING_5 zf-C3HC4_3 zf-RING_2 zf-C3HC4_4
Other DBs
NCBI-GeneID: 102598459
NCBI-ProteinID: XP_006363764
LinkDB
Position
Un
AA seq 823 aa
MSADSMHNPSLNEEVVHTAEVFNMVKQEQMDVVTEKEWEYRALKARIEERKKDRKKKQED
RPTLMWETWEETYDKWLVKHFADDLDNQNEFLCETAEPSSDMIVPLFRYQKEWLFWALKQ
EESSSKGGILADEMGMGKTIQAIALVLAKRELGKTISKSSLLSSSSSTKQELSAVKGTLI
LCPMVAVLQWVTEINRCTIEGSNKILVYHGSNRRKLSHDIEEYDFVITTYSTVEAEYRKY
VMQPKQKCKWCGKAYYEEKLPIHQKRYCGPDGVKTAKQSKKQRKKLKLDGELLMQQTDST
ESETYLQITDYMESETNVQEEGSTPETDMKKTGRRKKSILHSVKWDRIILDEAHYVKDRR
CNTTKATLSLKSSYKWALSGTPIQNLVGELYSLVRFLQIVPYSFYFCKDCDCRTLDYRYS
TSECPQCPHKSVRHFCWWNRYIATPIKREGSYGSGRDAMFLLKHKILKSILLRRSKKGRA
ADLALPLKIVTLRKDSLDVIEEDYYTSLYNKSQAQFNTYVKGGTLMNNYAHIFELLTRLR
QAVDHPYLVVYSTTALAKMANSGNVEQPCGLCHDAVEDPAVTSCMHVFCKTCLIEFAASV
RQVPCPLCSELLTIDFTVNIDMVDQNSKQTLKGFRSSSILNRIQLDDFQSSTKIDALREE
IRFMIERDGSAKGIVFSQFTSFLDLIHYSLQKSGINCVQLVGSMSIDARAAAVTKFTEDP
DCRIFLMSLKAGSVALNLTVASQVFMMDPWWNPAVERQAQDRIHRIGQYKPVRIVRFVIE
NTVEEKILKLQEKKELVFEGTIGGSSEAFAKLTEADLKFLFTT
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgtctgcagattcgatgcacaatccaagcttaaatgaggaagttgttcacacagcagaa
gttttcaatatggtgaaacaagaacaaatggatgtagttactgaaaaagagtgggagtat
cgtgcattgaaggcaaggatagaagaaaggaaaaaagaccgcaagaagaaacaagaggac
agaccaactttaatgtgggagacttgggaagaaacatatgacaaatggcttgtgaaacac
ttcgcagatgatttggataatcagaatgagtttttgtgtgaaacggcggagccatcatca
gatatgattgtgccattgttcaggtaccagaaagagtggttgttttgggcacttaagcaa
gaagaatcttcatccaaagggggtattcttgctgatgagatgggaatggggaagaccatc
caagcgatagcacttgtgcttgctaaacgggaactagggaaaacaattagcaaatctagt
ttattgtcatcttcatccagtactaagcaggaactctcagcagtaaaaggcactcttatc
ttatgtcctatggttgctgtccttcagtgggttactgagatcaatcgatgcaccattgaa
ggtagcaacaaaattcttgtgtatcatggttccaacagaaggaaacttagccacgatatt
gaagaatatgattttgtcatcaccacatactccactgttgaggctgaatataggaaatat
gtcatgcagccaaaacaaaagtgcaagtggtgtggcaaagcatattatgaagaaaagttg
cccattcaccagaagaggtattgtggaccagatggtgttaaaactgccaagcagtcaaag
aagcagaggaagaagttaaaacttgacggggaattgttgatgcagcaaacagattctact
gagtcagagacttatttgcagataacagattatatggaatcagagacgaatgtgcaggaa
gaaggttctaccccggagactgatatgaagaaaacgggtcgtaggaagaagtcaattttg
cattcagtgaagtgggatcgcatcatcttggatgaggctcattatgtaaaagataggcgc
tgcaacacgacaaaagctactcttagtttgaaatcttcttataagtgggccttaagtggt
actccgattcagaatcttgttggagaattgtattcacttgtccgtttcctacaaatagta
ccctactcattttacttttgcaaggactgtgattgcagaacacttgactataggtactct
acatccgagtgcccacaatgcccccacaaatcagtacggcacttttgctggtggaacaga
tacattgctacacctataaaacgtgaaggaagttatgggagtggtagagatgcgatgttc
cttttgaagcataaaattctaaaaagcatcctactaaggcgtagtaaaaaaggaagagct
gctgatcttgctcttcctcttaaaattgttactttgagaaaagattctttggatgtcata
gaagaagactactacacgtcattgtacaataaaagccaggcacaatttaatacttatgtt
aaaggtggaacattgatgaataactatgcacacatttttgagctgcttacacgcctacgg
caggcagttgatcatccttatcttgtggtgtactcgactactgctttggctaaaatggca
aactctggaaatgttgagcaaccttgtggcttatgtcatgatgcagtagaagatccagct
gttacttcttgcatgcatgtcttttgcaagacgtgtttgatagagtttgctgcaagtgtt
agacaagtgccatgccctctgtgttctgaactacttacaattgacttcactgtaaatatt
gatatggtggatcagaattctaaacagactctcaaagggtttagatcctcaagtatactg
aacagaattcagctagacgatttccagtccagcactaaaatagatgctttgagggaagaa
attaggttcatgattgaaagagatggttctgcaaaaggaatagttttcagccagttcaca
tcgtttttggatttgatacactattctcttcagaagtcgggcatcaattgtgttcaatta
gtcggatctatgtctattgacgcaagagctgcagcagttaccaaatttactgaggatcca
gattgccggatatttcttatgagcttaaaagctggaagtgttgcactcaatcttacggtt
gcatcacaggttttcatgatggatccttggtggaatcctgctgtggagcgccaagcacaa
gaccgaattcatcgaatagggcaatataaacccgtcaggattgtgagatttgtgattgaa
aatacagttgaagagaagatcttaaagttacaggagaagaaggaacttgtttttgaaggg
acaattggtggctcttcagaggcctttgcaaagctaactgaagcagacttgaaattcttg
tttacaacttaa

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