Solanum tuberosum (potato): 102604886
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Entry
102604886 CDS
T02981
Name
(RefSeq) transcription factor PIF4
KO
K16189
phytochrome-interacting factor 4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102604886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sot03000
]
102604886
Transcription factors [BR:
sot03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102604886
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
TAF1C_C
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
102604886
NCBI-ProteinID:
XP_006357888
UniProt:
M1BAZ9
LinkDB
All DBs
Position
Un
AA seq
517 aa
AA seq
DB search
MNPCLPEWNIETELPVPHQKKPMGFDHELVELLWRNGEVVLHNQTHKKQPGYDPNECRQF
NKYDQPTIRVAGNQTNLIQDDETVSWLNCPIYDSFDKEFCSPFLSDISTNPHLGEEPDKS
IRQSEDNNKVFKLDPLEINHVLPQSHHSGFNPNPMPPPRFHNFGSAQQKHHIVGGNQKGV
NFPPPIRSSNVQLGGKEARSNLMLQDIKEGSVMTVGSSHCGSNQVDTSRFSSSANRGLSA
AMITDYTGKISPQSDTMDRDTFEPANTSSSSGRSGSSYARACNQSTATNSQGHKRKSRDG
EEPECQSKADELESAGGNKAAQKSGTARRSRAAEVHNLSERRRRDRINEKMKALQELLPH
STKTDKASMLDEAIEYLKSLQMQLQMMWMGSGMASMMFPGVQHYMSRMGMGMGPPSVPSM
HNAMHLARLPLVDPAIPLTQAAPNNQAAAMCQNSMLNQVNYQRHLQNPNFPEQYASYMGF
HPLQGTSQPINIFGLGSHTAQRSQQLPHPTNSNAPAT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatgtcttcctgaatggaatattgagactgaacttcctgttccacatcaaaag
aagcctatgggatttgatcatgagctagtggagttgttgtggcgaaacggggaggtagta
ttacataaccaaacacataaaaagcagccaggctatgatcctaatgaatgcagacagttt
aacaaatatgatcaaccaacaataagagttgctggaaatcagactaatttgattcaagat
gatgaaactgtctcgtggctaaactgccctatctatgattcgtttgacaaagaattttgt
tcccctttcttatctgatatttcaacaaatcctcacctaggggaggaacctgataagtca
attaggcaatcagaggacaataataaggttttcaagcttgatcctttagagatcaaccat
gttcttccgcaatcacatcattctggtttcaatccaaatccaatgccacctccaagattt
cacaactttggatcagcacaacagaaacatcatatagtaggggggaatcagaaaggtgtt
aactttcctccaccgataaggtcatccaatgtgcagcttggtggcaaagaagctagaagc
aatctgatgctgcaagatatcaaagaggggtctgtgatgacagttggttcaagccactgt
ggaagcaatcaagttgatactagcaggttttcaagtagtgcaaatagagggttgtctgca
gcaatgatcactgattataccggaaaaatcagtccacaaagtgatacaatggaccgagac
acatttgaaccagctaatacatcttcgtcttcaggaagatcgggtagtagttatgcaaga
gcatgcaatcaatctacagcgaccaatagccagggccacaaaaggaagagtagagacggt
gaagaaccagaatgccagagtaaagctgatgagctagaatcagctggaggaaacaaggca
gcccaaaaatctggaactgcccgaaggagccgtgctgcagaagtgcataatctctctgaa
aggagacggagggacagaatcaatgagaaaatgaaggccttgcaagagcttcttcctcac
tctactaagacagacaaagcatcaatgttggatgaggctattgaatacttgaagtcactt
cagatgcaactgcagatgatgtggatgggaagtggcatggcatcaatgatgtttcctggt
gtccaacactacatgtccagaatgggaatggggatgggtccgccttcggtgccttccatg
cacaatgctatgcatttagctaggcttcctttggttgatccagcaatccctttgacacaa
gctgcccctaataatcaagcagctgcaatgtgccagaattcaatgttgaatcaagttaac
tatcaacgccatttgcagaatcccaattttccagaacaatatgctagttacatggggttc
catccacttcaaggcacttctcagcctataaacatttttggcttaggttcacatacagca
cagcgaagtcagcagttaccgcatccaactaatagtaatgcacccgccacttga
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