Stenotrophomonas oahuensis: PDM29_00100
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Entry
PDM29_00100 CDS
T10110
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_00100 (dksA)
03021 Transcription machinery [BR:
sou03021
]
PDM29_00100 (dksA)
03009 Ribosome biogenesis [BR:
sou03009
]
PDM29_00100 (dksA)
Transcription factors [BR:
sou03000
]
Prokaryotic type
Other transcription factors
Others
PDM29_00100 (dksA)
Transcription machinery [BR:
sou03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
PDM29_00100 (dksA)
Ribosome biogenesis [BR:
sou03009
]
Prokaryotic type
rRNA transcription factors
PDM29_00100 (dksA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
SaeA_1st
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
WNH52710
UniProt:
A0ABY9YQ14
LinkDB
All DBs
Position
complement(24087..25265)
Genome browser
AA seq
392 aa
AA seq
DB search
MAAKKTAKKAVQAAKKTAKPVVKKAAKSVAKKPATKPVVAKKAAAKPAPKAPAKKVAAPA
KPAKKAAPAKPVAKAPVKKPVVAKKAAPKPVAKAPAKKVAAPAKAVKAPAKPAAKPAPVK
QAVAKPAPAKAASKPVASKPAAKPAAAPVVKSAPKSAPPAPAKSVPAKAAAKPAPAPAAA
PKAAAAAPAPKAPQNKNPVPVSKSPAKTPAKSEPTAKPAVQRPVGKVAVAVAARSSAPAP
RTKVKVVEYKTDEATGRPILPAGYKPSAEEEYMSPLQLEYFRQRLQQWRGELVEESKQTI
ENLKEEVRDIGDEAERATRETENSLELRTRDRYRKLIGKIESTLKRLEAGDYGYCVDTGE
EIGLDRLEARLTAERTIDAQERWEHMQKQQGD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctaaaaaaactgcaaagaaggccgtccaggccgccaagaaaaccgccaagcct
gtagtcaagaaggcggccaagtccgttgccaagaagccggcgaccaaaccggtcgtggcc
aagaaggcggctgccaagccggctccgaaggcaccagcaaagaaggttgccgctccggcc
aagcccgcaaagaaggcggctccggccaagcctgttgccaaggcaccggtcaagaagccg
gtggtggcgaagaaggctgcgcccaagccggtcgccaaggccccggcaaagaaggtcgcc
gctccggccaaagccgtcaaagcacccgcaaagccggcggccaagcccgcgccggtgaag
caagccgttgccaagccggcaccggccaaggctgccagcaagcccgtggcatccaagccg
gccgccaagccggccgcagcacccgtagtgaagtccgcaccgaagtcggctccgccggct
ccggccaagtctgtcccggccaaggccgcggccaagcctgctcctgccccggccgctgcg
ccgaaggcggcagcggctgcccccgcgccgaaggccccgcaaaacaagaatcccgtgccc
gtttcgaaatcgcctgcaaaaacccccgccaagtccgagcccaccgccaagcctgccgtg
cagcgccccgtcggcaaggtcgccgtggccgtcgccgcgcgctcgtccgccccggctccg
cgcaccaaggtcaaggtagtggagtacaagaccgacgaggccaccggccgtccgatcctg
cccgccggctacaagccgagtgcagaagaggaatacatgagcccgctgcagctggagtat
ttccgccagcgtctgcagcagtggcgtggtgagctggtcgaagagtccaagcagaccatc
gagaacctcaaggaagaagtccgcgacatcggcgacgaagccgaacgcgccacccgcgaa
acggaaaattcgctcgaactgcgtacccgcgaccgctaccgcaagctgatcggcaagatc
gaaagcaccctgaagcgtctggaagccggcgactacggctactgcgtcgacaccggtgaa
gagatcggcctggaccgcctggaagcgcgtctgaccgccgaacgcaccatcgacgcccag
gagcgttgggagcacatgcagaagcagcagggcgattga
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