Stenotrophomonas oahuensis: PDM29_15515
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Entry
PDM29_15515 CDS
T10110
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sou Stenotrophomonas oahuensis
Pathway
sou01501
beta-Lactam resistance
sou01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM29_15515
01503 Cationic antimicrobial peptide (CAMP) resistance
PDM29_15515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_15515
01504 Antimicrobial resistance genes [BR:
sou01504
]
PDM29_15515
Transporters [BR:
sou02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PDM29_15515
Antimicrobial resistance genes [BR:
sou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM29_15515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WNH51739
UniProt:
A0ABY9YLI0
LinkDB
All DBs
Position
3465126..3468638
Genome browser
AA seq
1170 aa
AA seq
DB search
MSSPGHDHGSEPHPADDGRGTGGGLVEFATRRRVTIFMCMLTLVLFGLIALGNLKVNLLP
DLSYPTLTVRTEYTGAAPTEIETLITEPVEEAVGVVKNLRKLKSVSRTGQSDVVLEFAWG
TNMDQASLEVRDKMEALNLPLEAKAPVLLRFNPSTEPIMRLVIASKADPATDADAVRQLT
ALRRYADEDLKKKLEPVAGVAAVKVGGGLEDEIQVDIDQQKLAQLNLPIDNVIKRLKEEN
INISGGRLEEGSQRFLVRTVNQFADLEDIRNLLVTTQSSTGSAADAAMQQMFAIAASTGS
DAAIAAASAAQSASSSSSTNIANGVPVRLKDVATVRQGFKEREAIIRLGGREAVELAIYK
EGDANTVATAAALRTRLEQIKSQIPGDAELTTIEDQSRFIEHAISDVKKDAVIGGLLAIL
IIFLFLRDGWSTFVISLSLPVSIITTFFFMGQLGLSLNVMSLGGLALATGLVVDDSIVVL
ESIAKARERGLGILQAAITGTREVSMAVVASTLTTIAVFLPLVFVDGIAGQLFRDQALTV
AIAIAISLLVAMTLIPMLSSLKGRPPLAFPEEAPHGTWQPQSRWLKPVAGSRRGLGALVR
WSVFGVAWVIVKLWRGLTAVVGPVMRKASDVAMKPYAGAERGYLKLLPSALAHPGKVLGL
AALAFVATLAMVPMLGADLIPQLAQDRFEMTAKLPAGTPLKQTDALVRELQLAHAKDDSI
ASLYGVSGSGTRLDANPTESGENIGKLTVVMAGGGSAKTEAEITERLRASMQGHPGVQVD
FARPALFSFSTPLEVELRGQDMATLERAGQALAAMLRNNPHYADVKSTVEEGFPEIQIRF
DQERAGALGLTTRQIADVVVKKVRGDVATRYSFRDRKIDVLVRAQEGDRASVESIRRLIV
NPGSARPVTLDAVAEVVATNGPSEIHRADQTRVAVVSANLRDIDLGGAVREVQAMVAEQP
LGAGVGMHIGGQGEELAESARSLIFAFGLAIFLVYLVMASQFESLLHPFVILFTIPLALV
GAILALMLTGKPISVVVFIGLILLVGLVTKNAIILIDKVNQLREAGVAKHEALVEGARSR
LRPIIMTTLCTLFGFLPLAVAMGEGAEVRAPMAITVIGGLLVSTLLTLLVIPVVYDLLDR
RGDAYYRERGRQHAHAAEGPISGGNAQEPA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcccgggcatgaccacggcagtgaaccgcacccggccgatgatggccggggc
accggcggcggcctggtggaattcgccacccgtcgccgcgtcaccatcttcatgtgcatg
ctcaccctggtgctgttcggcctgatcgcgctgggcaacctcaaggtcaacctgctgccg
gacctgagctatccgaccctgacggtgcgcaccgagtacaccggtgccgccccgaccgaa
attgaaaccctgatcaccgaaccggttgaagaagccgtgggcgtggtcaagaacctgcgc
aagctgaagtcggtctcgcgtaccggccagagtgacgtggtgctggagtttgcctggggc
accaacatggaccaggccagcctggaggtgcgcgacaagatggaagcgctgaacctgcca
ctggaggccaaggccccggtgctgctgcgcttcaatccgtccaccgagccgatcatgcgc
ctggtgatcgcatccaaggccgacccggccacggatgccgacgcggtgcgtcagctgacc
gcgctgcgccgttatgccgacgaagacctgaagaagaagctggaacccgtggccggcgtg
gcggcagtgaaggtgggcggtggtctggaagacgagatccaggtcgacatcgaccagcag
aagctggcccagctcaacctgccgatcgacaacgtgatcaagcggctcaaggaagagaac
atcaacatctccggcggccgcctggaagagggctcgcagcgcttcctggtgcgcacggtg
aaccagttcgccgacctggaagacatccgcaacctgctggtaaccacccagagcagcacc
ggcagcgccgccgacgcggccatgcagcagatgttcgcaattgccgcgtccaccggttcg
gacgcggccatcgccgcggcctcggccgcacagagcgcgtccagcagcagttccaccaac
atcgccaatggcgtgccggtgcggctgaaggacgtcgccacggtgcgccagggcttcaag
gaacgcgaagcgatcatccgcctgggcggacgtgaagcggtcgaactggcgatctacaag
gaaggcgatgccaacaccgtggctaccgccgccgcgctgcgcacgcgcctggaacagatc
aagtcgcagattcccggcgatgccgaactgaccacgattgaagaccagtcgcgcttcatt
gaacacgcgatcagcgacgtcaagaaggacgcggtgatcggcggcctgctcgcgatcctg
atcatcttcctgttcctgcgtgatggctggagcacgttcgtgatcagcctgtcgctgccg
gtatcgatcatcaccacgttcttcttcatgggccagctggggcttagcttgaacgtgatg
tcgctgggcggcctggcgctggccaccggcctggtggtggatgattccatcgtggtgctg
gaaagcatcgccaaggcgcgtgagcgtggcctgggcattctgcaggcggccatcaccggc
acccgcgaagtgagcatggcggtggtggcctccaccctgaccaccatcgcggtgttcctg
ccgctggtgttcgtggacgggatcgcaggccagctgttccgcgaccaggccctgaccgtg
gcgattgcgattgcgatctcgctgctggtggcgatgaccctgattccgatgctgagctcg
ctgaagggccgcccgccgctggcgttcccggaagaagccccgcacggcacctggcaaccg
cagagccgctggctgaagccggtggccggcagccgccgtggcctgggcgcgctggtgcgc
tggagtgtgttcggcgtggcctgggtgatcgtcaagctgtggcgtggcctgactgccgtg
gtcggtccggtgatgcgcaaggccagcgacgtggcgatgaagccctatgcgggtgcagag
cgcggttacctcaaactgctgcccagtgctctggcgcacccgggcaaggtgttgggtctg
gccgccttggccttcgtcgccacgctggcgatggtgccgatgctgggcgcggacctgatt
ccgcagttggcccaggaccgcttcgagatgaccgcgaagctgccggccggtacgccgctg
aagcagaccgacgcgctggtgcgtgagctgcagctggcgcatgccaaggatgacagcatc
gcgtcgctgtatggcgtgagcggcagcggcacccggctggatgcgaatcccaccgagagc
ggcgagaacatcggcaagctgaccgtggtgatggccggcggtggtagtgcaaagaccgaa
gcggagatcaccgaacgcctgcgtgcctcgatgcagggccacccgggtgtacaggtcgac
ttcgcccggccggcgttgttcagcttctccacgccgctggaagtggagctgcgcggccag
gacatggccacgctggaacgcgccggccaggccctggccgcgatgctgcgcaacaacccg
cactacgccgacgtcaagtcgacggtggaagaaggcttcccggaaatccagatccgcttc
gaccaggagcgcgccggtgcgctgggcctgaccacgcgccagatcgccgacgtggtggtc
aagaaagtgcgcggcgacgtggccacccgctacagcttccgcgaccgcaagatagatgtg
ctggtgcgggcgcaggaaggtgatcgcgccagcgtggagagcatccgccgcctgatcgtc
aatccgggcagtgcgcgtccggtgacgctggacgcggtggcggaggtggtcgcgaccaac
ggtcccagcgagatccaccgcgccgaccagacccgcgtggcggtggtgtcggccaacctg
cgcgacatcgatctgggcggtgcggtgcgggaagtgcaggccatggtggctgagcagccg
ctgggtgccggggtcggcatgcatatcggcgggcagggcgaggagctggccgaatcggca
cgctcgctgatcttcgccttcggcctggcgatcttcctggtgtacctggtgatggcctcg
cagttcgaatcactgctgcacccgttcgtcattctgttcaccattccgctggcgctggtc
ggcgcgatcctcgcgctgatgctgaccggcaagccgatctcggtggtggtgttcatcggt
ttgatcctgctggtggggctggtgaccaagaacgcgatcatcctgatcgacaaggtcaac
cagctgcgcgaggccggcgtggccaagcacgaagcgctggtggaaggggcgcgctcgcgt
ctgcgcccgatcatcatgaccacgctgtgcacgctgttcggcttcctgccgctggcggtg
gccatgggcgagggcgcggaagtgcgtgcgccgatggcgatcacggtcatcggtggcctg
ctggtgtccacgctgctcaccctgctggtgattccggtggtgtatgacctgctggaccgt
cgcggcgatgcttactaccgcgaacgcggtcgccagcatgcgcatgcggccgaaggcccg
atcagcggcggcaacgcccaggagccggcatga
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