Stenotrophomonas oahuensis: PDM29_17035
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Entry
PDM29_17035 CDS
T10110
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sou Stenotrophomonas oahuensis
Pathway
sou01501
beta-Lactam resistance
sou01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM29_17035
01503 Cationic antimicrobial peptide (CAMP) resistance
PDM29_17035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sou03036
]
PDM29_17035
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_17035
01504 Antimicrobial resistance genes [BR:
sou01504
]
PDM29_17035
Chromosome and associated proteins [BR:
sou03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PDM29_17035
Transporters [BR:
sou02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PDM29_17035
Antimicrobial resistance genes [BR:
sou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM29_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
BSH_RND
BSH_CusB
Biotin_lipoyl
CzcB_C
HH_AAEA_pHBA
BSH_CzcB
BSH_YknX
BSH_YhbJ
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
WNH52027
UniProt:
A0ABY9YMS1
LinkDB
All DBs
Position
3810250..3811356
Genome browser
AA seq
368 aa
AA seq
DB search
MKHRLTALTAALLLVVAALALGWHQSRSSAPPSGAAVPVLSVTLVQPRHERLPVRVPATG
NIAAWQEASVGAETDGQRLTEVLVNVGDVVQQGQLLARFSPTSLQASLAEAEAAVTLARA
EADEAASNHQRAQGLDAAGVMSKQQVGQYSAVALTSRARLQAAQAVAELARLRVQQTRVL
APSDGTISARTATVGAVVPAGQELFRLIKDHRLEWRAVVSTTGLAQVQAGQPVRIATPAQ
PDVVGRVRMVGPMIDTATRSGLVFVDLPTTTVLRAGAFAQGQIEVGDHAGLTLPNNAVLA
RDGLDYVMEVGQGGAVHTRRVTLGQRVGERVEISAGLDAGTRVIGSGLGLLNDGDTVRVV
NGTAGGMR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaccgccttactgccctgaccgcagcgctgctgctggtcgtggctgcgctcgcc
cttgggtggcatcaatcccgttccagcgcaccgccgtcaggtgcagccgtgccggtcctt
tccgtcaccctggtgcagccacggcacgaaaggctgccggtgcgggtgccggcgaccggc
aatatcgcggcctggcaggaggccagcgttggagccgagacagacggccagcgcctgacc
gaagtgctggtcaacgtcggtgacgtggtgcaacagggccaactgctcgcacgattcagc
ccgacatcgctgcaggcctcgctggccgaagccgaggcggccgtgacgctggcgcgcgcc
gaagccgatgaggcagcgagcaatcaccagcgcgcacagggtctggacgcagcaggggtg
atgtccaagcagcaggtggggcagtacagcgctgtcgcgctgaccagtcgcgcccggctg
caggccgcgcaggccgtggccgagcttgcgcggttgcgcgtgcagcagacccgggtgctg
gctccctccgacggaaccatcagcgcgcgtacggcgaccgtgggtgccgtggtaccggcc
ggccaggaactgttccggctgatcaaagaccatcggctggaatggcgtgcggtggtatcc
actacggggctggcgcaggtgcaggccggccagccggtgcgaatcgccactccggcgcag
cccgacgttgtgggtcgggttcgcatggtcggcccgatgatcgataccgccacgcgtagt
gggctggttttcgtggacctgccgacgacaaccgtgctgcgtgccggtgcattcgcacaa
gggcagatcgaggtgggtgatcacgccggcctgacgttgccgaacaacgcggtgttggcg
cgcgacggcttggattacgtgatggaagtggggcagggcggtgcggtgcacacgcgtcgg
gtcacgttggggcagcgcgtgggcgagcgggtggagatcagtgcggggctggatgccggc
actcgcgtcatcggctcaggtctgggtctgctcaacgacggtgacacagtgcgcgtggtg
aacggcactgcggggggcatgcgatga
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