Stenotrophomonas oahuensis: PDM29_20270
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Entry
PDM29_20270 CDS
T10110
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00020
Citrate cycle (TCA cycle)
sou00785
Lipoic acid metabolism
sou01100
Metabolic pathways
sou01110
Biosynthesis of secondary metabolites
sou01120
Microbial metabolism in diverse environments
sou01200
Carbon metabolism
sou01210
2-Oxocarboxylic acid metabolism
Module
sou_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sou_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PDM29_20270
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PDM29_20270
Enzymes [BR:
sou01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PDM29_20270
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WNH52626
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All DBs
Position
4537472..4540303
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AA seq
943 aa
AA seq
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MDNLLKQFAQSSQLAGGNASYVEDLYEQYLVSPDSVDPKWKTYFDGFKGREAGDIPHSAV
IAHIADAAKDALKAGTGAGAGDERERNVGRLITAYRSRGHLDAKLDPLGLAQAVNSPDLG
LPFHSLSEGDLNAEFSTGGVGGQPRMKLRDLLARLKATYTGSIGAEFMHISEVEQRQWIY
QRLELAGGNYNLDADTKRRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDALIPMMDTII
RDAGKDGVKDVVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHDEHASAGDVKYHMGF
SADVATDGGPVHLALAFNPSHLEIADPVVAGSVRSRQERRKDTARKQVMPILIHGDAAFS
GQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPEDTRSTRYATDVAKMIAAPVLH
VNGDDPEAVVFAAKLAFDFRQKFAKDVVLDLMCYRRWGHNEADEPAITQPLMYQVIRKHQ
TTRELYAAQLEQAGVIAAGAGKAMVDAYREKLDAGEVTTELAKVEKTPPTSPLFVDWPKL
LEGKLSDPVSTKVEMGKLKQLAEMINTVPAEVELHSRVAKVYDDRRKMAAGEIPGDWGFA
ENLAYATLLDEGHAMRLVGQDVGRGTFTHRHAILHDQKTDNYYLPLRQLVDSPEKVAVID
SLLSEEAVMAYEYGFSTTDPNTLCIWEGQFGDFANGAQVVIDQFIAAGEAKWGRISGLTL
LLPHGYEGQGPEHSSARLERFLQLCALENMLVVVPSTPAQAFHMLRRQLHLTTRKPLVVM
SPKSLLRHKLAVSTLDELANGEFQHLIGDANADAKKVKRVVLCSGKVYYDLLEDQTKRGQ
DDVAIIRVEQLYPFPRALLAAELKKYGKATDVVWTQEEPQNQGAWYQIRHHLQFCLADGQ
NLHYAGRARSASPAAGHMADHIIEQQKLVADALVNPFNDVVAE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctactgaagcagtttgcgcagtcatcgcagctcgccggcggcaacgcctcc
tatgtcgaggatctgtacgagcagtacctcgtttctccggacagtgtcgatcccaaatgg
aagacctacttcgacggcttcaagggccgcgaagcaggtgacattccgcactcggccgtc
atcgcccacattgccgacgccgccaaggacgccctcaaggccggtaccggcgctggcgca
ggcgacgaacgcgagcgcaatgtcggtcgcctgatcacggcctaccgctcgcgcggccac
ctggacgccaagctcgacccgctgggtctggcccaggccgtgaactcgcccgatctgggc
ctgcccttccacagcctgtccgaaggcgacctcaacgccgagttcagcaccggcggtgtc
ggtggccagccgcgcatgaagctgcgcgacctgctggcgcgcctgaaggcgacctacacc
ggctcgatcggtgcggagttcatgcacatctccgaggtcgagcagcgccagtggatctac
cagcgcctcgaactggccggcggcaactacaacctcgatgcggacaccaagcgccgcacc
ctggaacgcctgaccgccgccgaaggcctggaacgctacctgcacaccaagtacgtcggc
cagaagcgcttctcgctggaaggcggcgacgcgctgattccgatgatggacaccatcatc
cgtgacgccggcaaggacggggtcaaggacgtggtgatcggcatggcccaccgcggccgc
ctgaacgtgctggtcaacaccctgggcaagaacccgcgcaagctgttcgacgaattcgaa
ggcaagttcgagcacgacgagcacgcctcggccggtgacgtgaagtaccacatgggcttc
tcggccgacgtcgccaccgatggcggcccggtccacctggcgctggcgttcaacccgtcg
cacctggaaatcgctgacccggtggttgccggctcggtgcgttcgcgccaggagcgtcgc
aaggacaccgcgcgcaagcaggtcatgccgatcctcatccacggcgacgcggccttctcc
ggccagggcgtggtcatggaactgttccagatgtcgcaggcccgcggcttcgccgttggc
ggcaccgtgcacatcgtggtcaacaaccaggtcggtttcaccacctccaacccggaagac
acccgctccacccgttacgcgaccgacgtggccaagatgattgccgcaccggtgctgcac
gtgaacggcgacgatccggaagcggtggtgttcgcggccaagctggcattcgatttccgc
cagaagttcgccaaggacgtggtcctcgacctgatgtgctaccgccgttggggtcacaac
gaagccgacgaaccggcgatcacccagccgttgatgtaccaggtcatccgcaagcaccag
accacccgcgagctgtacgccgcgcagctggaacaggccggcgtgatcgccgccggtgcc
ggcaaggccatggtcgatgcctaccgcgagaagctggatgccggtgaagtcaccaccgag
cttgccaaggtcgaaaagaccccgccgaccagcccgctgttcgttgattggccgaaactg
ctggaaggcaagctgtccgacccggtctcgaccaaggtcgagatgggcaagctcaagcag
ctggccgaaatgatcaacaccgtgccggccgaagtggagctgcactcgcgcgtggccaag
gtgtacgacgaccgtcgcaagatggccgccggcgagatcccgggcgactggggcttcgcg
gaaaacctggcttacgccaccctgctcgacgaaggccacgccatgcgcctggtcggccag
gacgtgggccgcggcaccttcacccaccgccacgcgatcctgcacgaccagaagaccgac
aactactacctgccgctgcggcagctggtggattcgccggaaaaggtcgcggtgatcgac
tcgctgctcagcgaagaagcggtgatggcctatgagtacggcttctccaccaccgatccc
aacaccctgtgcatctgggaaggccagttcggtgacttcgccaacggcgcgcaggtggtc
atcgaccagttcatcgccgccggtgaagccaagtggggccgtatctccggcctgaccctg
ctgctgccgcacggctatgaaggccaaggcccggaacacagctcggcgcgcctggagcgc
ttcctgcagctgtgcgcactggaaaacatgctggtggtggtgccctccaccccggcgcag
gccttccacatgctgcgtcgccagctgcacctgaccacccgcaagccgctggtggtgatg
tcgcccaagtcgctgctgcgccacaagctggccgtgtcgaccctggacgaactggccaac
ggcgagttccagcacctgatcggcgatgccaacgcggacgccaagaaggtcaagcgcgtg
gtgctgtgctcgggcaaggtctactacgacctgcttgaagaccagaccaagcgcggccag
gacgacgttgccatcatccgcgtggaacagctgtatccgttcccgcgcgcgctgctggcc
gccgagctgaagaagtacggcaaggccaccgacgtggtgtggacgcaggaagaaccgcag
aaccagggtgcgtggtaccaaatccgccaccacctgcagttctgcctggccgacggccag
aacctgcactacgccggtcgcgcgcgttcggcttcgccggccgccggtcacatggctgac
cacatcatcgagcagcagaagctggtcgccgatgccctggtcaacccgttcaacgacgtt
gtcgctgaataa
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