KEGG   Sitophilus oryzae (rice weevil): 115890526
Entry
115890526         CDS       T07985                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
soy  Sitophilus oryzae (rice weevil)
Pathway
soy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:soy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    115890526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soy03400]
    115890526
Enzymes [BR:soy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     115890526
DNA repair and recombination proteins [BR:soy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     115890526
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N RNA_ligase DNA_ligase_A_C DNA_ligase_IV BRCT_2 BRCT mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 115890526
NCBI-ProteinID: XP_030766631
UniProt: A0A6J2YTW8
LinkDB
Position
Unknown
AA seq 854 aa
MNNLKDFENLCKFLNSVREADKPNNKTSIIKDYFDQWRECQPKEAMFSLLRLIVPKLDRA
RESYGLKEAKIARILIKMLALPTGHDRNVLSKSYLMSGQASDFGDVVYSVIRKYLANKKT
VLTIDELNLSLDSIANRNNESEAEDVLIKLFKKCACEDSRWIIRIILKDLKLGISETRIL
NCYHHDAAQFYSSNHSLEKVTHVLYDKNINICELDIAIFEAFRPMLSKRVNHSSFKKDFQ
ENKLYYVENKFDGERFQIHMDNKIFKYFSRNGYDYTDTFGPSYESGILTPKFKNLFKEST
NNIILDGEMMLWNTITKKYGSKGMEFDVKRLKESGKLQPCYCVYDIILLNNRVLTGKPLR
ERVALLRQIFTKTIPGIVVLSEITEVHSCQEIVDELNSAVAREDEGIVVKDPESFYKYGD
RNSGWFKIKLEYFQDTMTDLDLILMGAQYASSTSDELNSFVVGIRSGNTENGDPIYLSFG
KVAIGLNYDQLDMLNKRIKELGRQYKNDKKPYLLFGKEIPNYYIEPKDSLIFVVRATELI
KNTDNSYRTQYTFRFPRIVRIREDKPVSECLNINELMELTQRNNSVIKLNKSRLELDELI
KVKRRNTKKKEIFVPVIGDTRQVSDILEDLKIYVLNGNEEKSKDDLEILVSRAGGTICYK
IDATVDIVLVGTINDKVKELFTKRNNYDVINVKWLYRTLADGNVLGYETLEIYCLGTNPK
NCLSDEVDRYGDSYTEEATIETLKHSFDVMGNLQEVPSFGGLIEVPGSKTFDMYKAYFDK
FTEINNVSSDIIYDSFFDELEFKYYNGDVCQTVGNETNIIVFYENERIAVINNFLSSIDR
LDIEVKSREFIYNK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgaacaatttaaaagattttgaaaatttatgtaaatttcttaattctgtgagggaagcc
gataaaccaaacaacaaaacttcgattataaaagattattttgaccaatggagggaatgt
cagccaaaagaagctatgttctcattgctaagattaatagtaccaaaactagatcgagca
agagaatcttacggtttgaaagaggcaaaaattgcaagaattttaataaaaatgttagca
ttacctaccggacatgataggaacgttcttagcaaatcatatttaatgtccggccaggcc
agtgactttggtgatgtagtttactcagtaattcgcaaatatttggcaaataaaaaaaca
gtactgacaattgacgaacttaatctgagtctcgacagtatagcgaatagaaataatgaa
tctgaagccgaggatgttttaataaagttatttaaaaaatgtgcttgcgaagactcgagg
tggataattcgtattattttgaaagatctaaagttgggtatttctgaaactagaatacta
aactgttatcaccatgatgcagcacagttttattcaagtaatcacagtttggagaaggtc
acacatgttttatatgacaagaatataaacatttgtgaattagatatagccatatttgag
gcttttagaccgatgttatctaaaagagtcaatcattcatcttttaagaaagattttcag
gaaaacaagctgtattatgttgaaaataaatttgatggtgaaaggtttcagattcacatg
gacaataagatttttaaatatttctcaagaaatggatatgattatactgatacttttgga
ccatcttatgaaagtggtattctgacgcctaaatttaaaaacctttttaaagaatccaca
aataacattatactagatggagaaatgatgttgtggaatacaataacaaaaaaatatggt
tcaaaaggcatggaatttgacgtaaagagactcaaagaaagtggcaaacttcagccatgt
tattgcgtatacgacattatacttctgaataacagagtccttactgggaaacctttgagg
gaacgagttgcgcttctaaggcaaatttttacaaaaactattcccggaattgttgttttg
agcgaaataacagaagttcatagctgccaagaaattgtcgatgaactaaacagtgctgta
gcaagagaagatgagggaatagtggtaaaagatccagaatcgttttataagtatggcgat
agaaacagtggatggtttaaaataaaactggagtattttcaggataccatgactgacctt
gatttaatattaatgggcgctcagtacgcatcctcgacttcggacgaactaaactcattt
gttgtcgggatcagatctggcaacactgaaaatggggatccgatttatttgtcgtttggt
aaagtagcaatcggtttaaattacgaccaactggacatgttgaacaaaagaatcaaagag
ttaggccgacaatacaaaaacgacaaaaaaccatacttgctctttggcaaagaaataccg
aattactatatcgaaccaaaagattcattaatcttcgttgtgcgcgccacagaattgatt
aaaaacaccgataattcttacagaacgcaatacacgtttaggtttccgagaatcgtaaga
ataagggaagataaacctgtctctgagtgtttaaacatcaacgaattgatggagttaaca
cagagaaataatagtgttataaaactaaacaaaagcagactagaactggatgaattgata
aaagtaaagagaagaaatactaaaaagaaagaaatatttgttccagttatcggcgacact
aggcaagtttctgatatactggaagacttaaaaatttatgtacttaatggaaacgaggaa
aaatctaaagatgatctagaaatactcgtttcgagagcgggagggactatttgttataaa
attgacgcgactgttgacatagtccttgttggtacaatcaacgataaggtaaaagaactt
ttcacaaaaagaaacaattatgatgttatcaatgtaaaatggctgtatagaactctcgct
gacgggaatgtgttaggctacgaaacattagaaatatattgtctagggacaaatccgaaa
aactgtctgtcagatgaagtagacaggtatggcgatagttatactgaagaagctactatc
gaaacgttgaaacacagttttgacgttatgggtaatctacaggaagttcctagttttggg
gggttaattgaagtacctggatcaaaaacttttgatatgtataaagcttattttgataaa
tttacagaaataaacaatgtgtcgtctgacattatttatgattcgttttttgacgagtta
gagttcaagtattataatggggacgtttgtcaaacagtcggtaatgaaacaaatataata
gtattttacgaaaatgaaagaatagcagttataaacaattttcttagcagtattgatagg
ttagatatagaagtaaaaagtcgagaatttatatataataaatga

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