Sphingobium sp. AntQ-1: sphantq_00066
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Entry
sphantq_00066 CDS
T10291
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spag Sphingobium sp. AntQ-1
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spag03032
]
sphantq_00066 (topA)
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_00066 (topA)
Enzymes [BR:
spag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
sphantq_00066 (topA)
DNA replication proteins [BR:
spag03032
]
Prokaryotic type
DNA Topoisomerases
sphantq_00066 (topA)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
sphantq_00066 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
SpoIIE
Toprim_4
DUF7343
Poly_export
Motif
Other DBs
NCBI-ProteinID:
WCP11686
LinkDB
All DBs
Position
1:complement(61847..64435)
Genome browser
AA seq
862 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGGDFHVLASYGHIRDLPAKDGSVDPDDGFAMSWENYGDKGK
QLKAIADASKTATRLILATDPDREGEAISWHVQEVLRAKKALPSQVDRVTFNAITKAAVL
DAMAKPRALDEDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLVVERE
REIESFSPQEYWSVAAEMEQGGQGFTARLVRWKGEKIDRLTIGKEGDAMAAKADVEAGRF
TVDKVETKPLTRNPPAPFTTSTLQQEAARKLGFSASHTMRIAQQLYEDGAITYMRTDGVQ
MDGSAISAARKAIAERYDGGYLPEKPRQYQTKAKNAQEAHEAIRPTEFGRDKVGSGDHAR
LYDLIFKRALASQMASARLERTTIDMIDGSGSHTLRATGQVVIFPGFLALYEEGRDDSDD
DDSKLLPRMSEGDAPAKKKVTAEQHFTQPPPRYSEASLVKRLEELGIGRPSTYASTLQVL
KDRDYVRIEKNRFFAEESGRLVTAFLERFFERYVSYDFTAGLEDELDDISGGRAQWQEVL
EAFWKDFKPKTAEIMEQKPSDITAELDKFLEPMLFPPRADGSNPRACPLCGDGQLSLRGG
RFGAFIACSNYPECKYTRKFGQPGGKDGEDSGPEVLGQHPETGQDIVKKSGRFGPYIEMG
EGKEAKRGSIPKDLPDGELTLDWGVKLLSLPREVGLHPETGLPIVANIGRFGPYLLHDGK
YGRLSSTSEIFEVGMNSAVVKLAEAANRGPRSAGREPLKVLGAHPRTELEIKLMEGRYGA
YVTDGTTNATLPKTVDKDQLTLEEAAQLIDARAAAAPAKKGKKKAAPKKAAAKKPAAKKD
GDTVKKPAAKKAPAKKKAAAAE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcatcgtagaatcgccggccaaggcgaagaccatcgagaaatatctgggc
ggcgattttcatgtcctcgccagctatggccatatccgcgacttgcccgccaaggacggg
tcggtggacccggacgacggcttcgccatgtcgtgggaaaattatggcgacaagggcaag
cagctcaaggccattgccgatgcgtccaagacggcgacgcgattgatcctggcgactgac
cctgatcgcgaaggggaagcgatcagctggcatgtgcaggaggtgctgcgcgccaagaag
gcgctgccgagccaagtggaccgagtgacgttcaacgcgatcaccaaggcggcggtgctc
gacgcgatggccaagccccgcgcgctggacgaggatctgattgatgcctaccgcgcgcgc
cgggcgctcgactatctggtgggcttcactttgtcgccggtgctgtggcgcaagctgccg
ggcgccaagtcggcgggccgcgtccagtcggtcgcgctgcggctggtggtggagcgcgag
cgcgagatcgaaagcttcagcccccaggaatattggtcggtcgcggccgagatggagcag
ggcgggcagggctttaccgcgcgcctcgtccgctggaagggcgagaagatcgaccgcctg
accatcggcaaggaaggcgacgccatggccgccaaggccgatgtggaggccggacgcttt
accgtcgacaaggtcgagacgaagccgctcacccgcaatccgcccgcgccgttcaccacc
tccaccttgcagcaggaagccgcgcgcaagctgggcttttcggccagccacacgatgcgg
atcgcgcagcagctctacgaagacggcgcgatcacctatatgcgtaccgatggcgtgcag
atggacggcagcgccatttccgccgcgcgcaaggcgatcgcggaacgctatgacggcggt
tacctgcccgaaaagccgcgccaatatcagaccaaggcgaaaaatgcgcaggaagcgcac
gaggccattcgtccgaccgagttcggccgcgacaaggtggggtcgggcgatcatgcgcgc
ctgtacgacctgatcttcaagcgcgcgctggcgagccagatggcgtcggcgcggctggag
cgcacgacgatcgacatgatcgacggatcgggcagccatacgctgcgcgcgacggggcag
gtggtgatcttcccaggcttcctggcgctctatgaagaaggccgcgacgacagcgacgat
gatgattcaaagctgctgccgcgcatgagcgagggcgatgcccctgccaagaagaaagtc
acggcagaacagcatttcacccagccgccgccgcgctattccgaagcgtcgctggtgaag
cgtctggaggagctggggatcgggcggccgtccacctatgcgtccacgttgcaggtgctc
aaggatcgcgactatgtacggatcgagaagaaccgcttcttcgccgaggagagcgggcgg
ctggtgacggcgttcctggagcgcttcttcgaacgctatgtgtcctacgacttcacggcg
ggactggaagacgagctggacgatatttccggcggccgcgcccagtggcaggaagtgctg
gaagctttttggaaggatttcaagcccaagaccgccgagattatggaacagaagccgtcc
gacattacggcggaactggacaagtttctggagccgatgctgttccctccgcgagcggac
ggcagcaatccccgcgcctgcccgctctgcggcgatgggcaattgtcgctgcgcggcggg
cggtttggcgcgttcatcgcctgctccaattatccggagtgcaaatatacgcgcaagttc
gggcagccgggcggcaaggatggcgaagatagcgggccggaggtgctgggccagcacccc
gaaaccggccaggatatcgtcaagaagtccgggcgttttggtccctatatcgagatgggg
gagggcaaggaggccaagcgcggctccattcccaaggatttgcccgatggcgaattgacg
ctcgattggggcgtgaagctgctgagcctgccgcgtgaagtggggctgcatcccgaaacc
ggattgccgatcgtggccaatatcgggcgttttggtccctatctgctgcatgacggcaaa
tatgggcggctgtcatccacgtcggagattttcgaggtcggtatgaacagcgcggtggtg
aagctggcggaggcggccaaccgtggtccgcgcagcgccgggcgcgaaccgttgaaggtg
ctgggcgcgcatccgcgcacggagttggagatcaagctgatggagggccggtacggcgcc
tatgtcaccgacggcaccaccaatgcgaccctgcccaagacggtggacaaggaccagttg
acgctggaggaagccgcgcagttgatcgacgcgcgggccgcggcggcgccggcgaagaag
ggcaagaagaaggccgcgccgaagaaggcggcggccaagaaacctgccgccaagaaggac
ggggacaccgtgaagaagccggccgccaagaaggccccggcgaagaagaaggccgcggcc
gcggagtag
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