| Entry | T10291 |
| Org code | spag |
| Name | Sphingobium sp. AntQ-1 |
| Annotation | yes |
| Taxonomy | TAX: 2930091 |
| Lineage | Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingobiaceae; Sphingobium; unclassified Sphingobium |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_028538045.1 Complete Genome)
BioProject: 821003 |
| Comment | Isolated from polycyclic aromatic hydrocarbons (PAH)-contaminated soil from a historical woodtreating facility in the south of Spain.
|
| Chromosome | 1; Circular |
| Sequence | GB: CP117158 |
| Length | 3758784 |
| Chromosome | 2; Circular |
| Sequence | GB: CP117159 |
| Length | 720548 |
| Plasmid | pANTQ-1; Circular |
| Sequence | GB: CP117160 |
| Length | 201917 |
| Plasmid | pl2; Circular |
| Sequence | GB: CP117161 |
| Length | 80951 |
| Plasmid | pl3; Circular |
| Sequence | GB: CP117162 |
| Length | 53641 |
| Plasmid | pl4; Circular |
| Sequence | GB: CP117163 |
| Length | 51841 |
| Plasmid | pl5; Circular |
| Sequence | GB: CP117164 |
| Length | 20675 |
| Plasmid | pl6; Circular |
| Sequence | GB: CP117165 |
| Length | 16164 |
| Statistics | Number of nucleotides: 4904521
Number of protein genes: 4700
Number of RNA genes: 76
|
| Created | 2024 |
| Reference | PMID: 36516361 |
| Authors | Jimenez-Volkerink SN, Vila J, Jordan M, Minguillon C, Smidt H, Grifoll M |
| Title | Multi-Omic Profiling of a Newly Isolated Oxy-PAH Degrading Specialist from PAH-Contaminated Soil Reveals Bacterial Mechanisms to Mitigate the Risk Posed by Polar Transformation Products. |
| Journal | Environ Sci Technol 57:139-149 (2023)
DOI: 10.1021/acs.est.2c05485 |
Sphingobium sp. AntQ-1