Sphingobium sp. AntQ-1: sphantq_00183
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Entry
sphantq_00183 CDS
T10291
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spag Sphingobium sp. AntQ-1
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spag03032
]
sphantq_00183 (gyrA)
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_00183 (gyrA)
Enzymes [BR:
spag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
sphantq_00183 (gyrA)
DNA replication proteins [BR:
spag03032
]
Prokaryotic type
DNA Topoisomerases
sphantq_00183 (gyrA)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
sphantq_00183 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WCP11795
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Position
1:185241..187919
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AA seq
892 aa
AA seq
DB search
MTDETVLADPSDISPISIVDEMKASYLDYAMSVIVARALPDVRDGLKPVHRRILFSAQES
GFVYNRPYRKSARLVGEVMGKYHPHGDSSIYDALARMTQDWSMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVATALLDDLDKDTVDFTPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVLRACLAYIDNPGITTDELIAIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRHVVEEGRGDRQSIVLTAIPYQVGKNGLVEKIAEAAKDKRIEGISDIRDES
SREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLGLREIIEAFVK
FREEVITRRTKFELNKARDRAHILLGLVVAVSNLDEMVKIIRGSSSPAEARERLLAREWP
IGEIAPYLRLVEAIETDVHGDIYKLSDIQVRAILDLRLHRLTALGRDEIGKELAELAEAI
AEYLAILGDRVKLYAVMREELEAIEKEFATPRLSEITAAADGIEDEDLIEREEMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAVTEMFVTSTHTPVLFFSTAGKVYRMKVW
RLPEGGPATRGRPMVNLLPLGPGETIRTVLPLPEDEDSWKDLHVMFATANGTVRRNSMDA
FANVPSNGKLAMRFDEGSEDRLIGVALLTEEDDVLLATRQGKAIRFAATDVREFQSRTST
GVRGMTLKNDDEVISLSILHRSGAEQEQREDYLRFAPWKPEKEGEMADQAMFVHMRENEQ
FILTVCANGYGKLSSAYDYRRTGRGGQGITNIDNIGRNGPVVASFAATQADQLMLVTDQA
KLIRMGLDSLRVIGRNSAGVRLFDVAKDEHVVSAAKIEESEEAEPTEATPVA
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagactgtcctcgccgacccttcggacatcagccccatctccatcgtggac
gagatgaaggccagctatctcgactatgccatgtccgtcatcgtggcgcgcgccctgccg
gacgtgcgcgacggtttgaagccggtccatcgccgcattctgttctccgcccaggaatcg
ggcttcgtctacaaccgcccctatcgcaagtctgcgcgcctggtcggcgaggtgatgggt
aaatatcacccgcatggcgacagttcgatctacgacgccttggcgcgcatgactcaggac
tggtcgatgcgggttccgctgatcgacggtcaggggaatttcggttccatggaccccgat
ccgccagcggccatgcgctacaccgaagcgcgcctggcgaaggtcgcgacggcgctgctg
gacgatctcgacaaggacacggtcgacttcacgcccaactatgatgcatcggaaagcgag
ccgcaggttctgcccgcgcgcttccccaacctgctggtcaatggcgcgggtggcatcgcg
gtcggcatggcgaccaacatcccgccgcataatctgggcgaagtgctgcgcgcctgcctc
gcctatatcgacaatcccggcatcacgaccgacgaactgatcgccatcgtccccggtccc
gatttccccaccgcgccgctgatcctgggccagtcgggcgcgcgcagcgcctatcatacc
ggccgcggctccatcatgatgcgctcgcgccatgtggtcgaggaagggcgcggcgaccgc
cagtcgatcgtcctgaccgccatcccctatcaggtcggcaagaacggcctggttgaaaag
atcgccgaagccgccaaggacaagcggatcgaaggcatcagcgacattcgcgacgagtcc
agccgtgaaggcgtgcggatcgtcatggacctgaagcgcgacgcgacccccgaagtcgtg
ctgaaccagttgtggcgcaacacgccggcccagtcgagtttcccggccaacatgctggcg
atccgcggcggtcgccccgaattgctgggcctgcgtgagatcatcgaagccttcgtcaag
ttccgcgaagaggtcatcacccgccgcaccaagttcgaactgaacaaggcgcgcgaccgg
gcgcatatcttgctgggcctggtcgtcgcggtcagcaatcttgacgaaatggtcaagatc
atccgcggatcgtccagcccggccgaagcccgcgaaaggctactggcgcgcgaatggccg
atcggcgagatcgccccctatctgcgcctggtcgaagcgatcgagacggatgtccatggc
gacatctacaagttgagcgacattcaggtccgcgcgatcctggacctgcgcctgcatcgc
ctgaccgctctgggccgcgacgaaatcggcaaggaactggccgaactggccgaggcgatc
gccgaatatctcgccatattgggcgaccgggtgaaactctatgcggtgatgcgcgaagag
ttggaggcgatcgaaaaggaatttgcgaccccgcgcctgtcggagatcaccgccgccgcc
gacggcatcgaggacgaggatctgatcgagcgcgaggagatggtcgtcaccgtcaccgtg
cagggctatatcaagcgcaccccgctcgaaagcttccgcgctcaggcgcgcggcggcaaa
ggccggtccggcatggcgaccaaagatgaggacgccgtcaccgaaatgttcgtgacgtcg
acccatacgccggtgcttttcttctcaaccgccggcaaggtctatcgcatgaaggtgtgg
cgcttgcccgaaggcggcccggcgacgcgcggtcggccgatggtcaacctgctgccgctc
ggccccggcgaaaccatccgcaccgtgctgccgctgcccgaagacgaggatagctggaag
gatctgcacgtcatgttcgcgacagcgaacgggacagttcgacgcaacagcatggacgcc
ttcgccaatgtgccaagcaacggcaagctggcgatgcgcttcgatgagggtagcgaagat
cgcctgatcggcgtggcgctgctgaccgaagaggatgacgttctgctcgctacccgccag
ggcaaggcgatccgcttcgccgcgaccgacgtgcgcgaattccagagccgcacttccacc
ggcgtgcgtggcatgacgctcaaaaatgatgacgaggtgatctcgttgtcgatcctgcat
cggtccggcgcggagcaggaacagcgcgaggattatctgcgtttcgccccgtggaagccg
gaaaaggagggcgaaatggccgatcaggccatgttcgtccatatgcgggaaaatgagcag
ttcattctgaccgtctgcgccaatggctatggcaagctgtcgtccgcctatgactatcgc
cgcaccgggcgcggtggtcagggcatcaccaatatcgacaatatcggccgcaacggcccc
gtggtcgccagcttcgccgctacccaggccgatcaattgatgctggtcaccgaccaggcg
aagttgatccgtatgggcctcgacagcctgcgcgtcatcggccgcaattcggcgggcgtc
cgcctgttcgatgtggccaaggacgaacatgtcgtgagcgccgccaagatcgaggaaagc
gaggaggccgaaccgaccgaggctacgccggtagcatga
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