Sphingobium sp. AntQ-1: sphantq_00209
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Entry
sphantq_00209 CDS
T10291
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
sphantq_00209 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
spag03011
]
sphantq_00209 (rpsA)
Ribosome [BR:
spag03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
sphantq_00209 (rpsA)
Bacteria
sphantq_00209 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RuvA_N
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
WCP11819
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Position
1:208141..209853
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AA seq
570 aa
AA seq
DB search
MASTAFPTRDDFAALLNDSLGGEDGGFEGRVVKGTVTAIENDLAVIDVGLKSEGRVPLRE
FAAPGQKADLKVGDEVEVYVDRVENAHGEAMLSRDRARREAAWDKLEAEFTESARVEGVI
FGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLIQTLAEGQIIEGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRINHPN
EMINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGAAAKYPIGAKLSGRVTNITEYGA
FVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVLVLEVDPEKRRISLGLKQAQSN
PWDSFAERHPIGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKG
EAVSAVVLDIDVEKERISLGMKQLERGGPAAGGTAAAAAGLNKNAIVTVTVLEVRDGGLE
VQAGEDGAAGFIKRSDLGRDRDEQRSERFQIGQKFDAMVTGFDRAKKPTFSVKAMQIAEE
KQAVAQYGSSDSGASLGDILGEALKAKSEG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggcatttcccacgcgcgacgatttcgccgcgcttctcaatgattctctc
ggtggtgaagacggcggctttgaaggccgcgtcgtcaagggcaccgttaccgccatcgaa
aacgacctggccgtcatcgacgtaggtctgaagtccgaaggccgcgtgccgctgcgcgaa
ttcgcagcgccaggccagaaggctgacctgaaggtcggcgacgaagtcgaagtctatgtc
gaccgcgtcgaaaacgcccatggcgaagccatgctgtcgcgtgaccgcgcccgccgcgaa
gccgcctgggacaagctggaagccgagttcaccgaaagcgcgcgcgtcgaaggcgtcatc
ttcggccgcgtcaagggcggcttcaccgtcgacctggacggcgccgtggcgttcctgccc
ggttcgcaggtcgacatccgcccggtgcgcgacgtcaccccgctgatggacattccgcag
cctttccagatcctcaagatggatcgccgccgcggcaacatcgtcgtgtcgcgtcgcgcc
atcctggaagaaacccgcgctgaacagcgcagcggcctgatccagaccctggccgaaggc
cagatcatcgaaggcgtcgtcaagaacatcaccgactatggtgcgttcgttgacctgggc
ggcatcgacggcctgctgcacgtcaccgacctgtcgtacaagcgcatcaaccaccccaat
gagatgatcaacatcggcgacaccgttcgcgtgcagatcatccgcatcaaccgcgacacg
cagcgcatctcgctcggcatgaagcagttggagagtgatccgtgggaaggcgccgccgcc
aaatatccgatcggcgccaagctgtcgggccgggtcacgaacatcaccgaatatggcgcg
ttcgtcgaactggagccgggcatcgaaggcctggtccatgtcagcgaaatgtcctggacc
aagaagaacgtccaccccggcaagatcgtgtcgaccagccaggaagtcgaagttctggtt
ctggaagtcgatcccgaaaagcgccgcatcagccttggcctcaagcaggcccagagcaat
ccgtgggacagcttcgccgaacgtcacccgatcggttcgaccgtcgagggcgaagtcaag
aatgcgaccgagttcggcctgttcatcggcctggacggcgacgtcgacggcatggtccac
atgtccgacatcgcctggggcatttcgggcgaagacgcgctggcgctgcaccgcaagggt
gaggccgtttcggccgtcgttctcgacatcgacgtcgagaaggagcgcatcagcctgggc
atgaagcagcttgagcgtggcggcccggccgctggcggcaccgctgctgcggctgccggc
ctcaacaagaacgcgatcgtcaccgtgaccgttctggaagtccgcgacggcggcctggaa
gtccaggctggcgaagacggcgcagccggcttcatcaagcgcagcgacctgggtcgcgac
cgcgacgagcagcgttcggaacgcttccagatcggccagaagttcgacgccatggtgacc
ggtttcgaccgcgccaagaagccgaccttctcggtcaaggcgatgcagatcgccgaagag
aagcaggcagtcgcacaatatggttcgtccgacagcggcgcgtcgctgggcgacatcctg
ggcgaagcgctcaaggcgaagagcgaaggctaa
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