KEGG   Sphingobium sp. AntQ-1: sphantq_00381
Entry
sphantq_00381     CDS       T10291                                 
Symbol
vapC_1
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
spag  Sphingobium sp. AntQ-1
Brite
KEGG Orthology (KO) [BR:spag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spag03016]
    sphantq_00381 (vapC_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spag02048]
    sphantq_00381 (vapC_1)
Transfer RNA biogenesis [BR:spag03016]
 Prokaryotic type
  tRNA degradation factors
   sphantq_00381 (vapC_1)
Prokaryotic defense system [BR:spag02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    sphantq_00381 (vapC_1)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: WCP11984
LinkDB
Position
1:complement(388823..389215)
AA seq 130 aa
MTFSLDANTIIALFKGNKQIWKNLERHSTLDCVVSSIVMHELYFGAFNSARVKENLDRIG
ALRFEVVDFARADSRTAGEVRTNLARIGKPIGPLDTLIAGQALARGFTVITRNIREFSRV
EGLSFENWED
NT seq 393 nt   +upstreamnt  +downstreamnt
atgacgttttcgctcgatgccaacacaatcatcgcgctgttcaaggggaataagcagatc
tggaagaatctcgagcggcacagcacgctcgattgcgtcgtgtcgtcgatcgtcatgcac
gaactctatttcggcgcgttcaacagcgcgcgggtcaaggagaatctggatcggatcggt
gccttgcggttcgaggtcgtggacttcgcgcgcgcagatagccgaacggccggagaggtt
cgaacgaacctggcccgcataggtaaacccatcgggccgctcgataccctgatcgcgggc
caggcgcttgcgcgcgggttcaccgtgatcacccgcaatatccgcgagttctcccgcgtc
gaggggctttctttcgagaattgggaagactga

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