Sphingobium sp. AntQ-1: sphantq_00500
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Entry
sphantq_00500 CDS
T10291
Symbol
cydD
Name
(GenBank) ATP-binding/permease protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
sphantq_00500 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spag02000
]
sphantq_00500 (cydD)
Transporters [BR:
spag02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
sphantq_00500 (cydD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
CybS
RsgA_GTPase
nSTAND1
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WCP12103
LinkDB
All DBs
Position
1:complement(498825..500123)
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AA seq
432 aa
AA seq
DB search
MLGEQVADAIDRIEDIDGYHARFLPLRFAAVATPLLIAASAALASWIAAAILLATLIPFA
LGMALAGSVASRAAARQLDVLGRLSGLFIDRIRALPLILGFGAQDRITRQLAEATQEVAR
RTVAVLRIAFLSGAIIEFFAALSVAMVAVYCGFNLLGLLPFPVPETLDLSRALYVLILAP
EFYLPMRRLAAAYHDKQVGEAALERLAALTPAPVVATSPVHMLAAPPAIRFESVVIDYGE
RRVGPISMHIAAGCVTALSGTTGTGKSSLLHALLGLAPVVAGDILLDGRPLSPEALRGEV
SWAGQATALVLGSLADNIRLARPHASDAEVEDVARRAGLTEVVQTRGAGLATLIDPRGSG
LSGGERRRVGIARALLRDAPLWLLDEPTADLDEGSAMELARHIVEAGRGRTVFLVTHSAA
IAALADHRVVLS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctcggggagcaggtcgccgatgctatcgaccggatagaggacattgacggctatcat
gcgcgcttcttaccgttgcgttttgcggcggtggcgacgcccttgctgatcgcggcatcc
gcagcgctggcgagttggattgcagcggccattctcctggcgacgctgatcccctttgcc
ctgggcatggcgctggcgggatccgtggcgagccgggcagccgctcggcagctcgacgta
ctggggcggctctcgggactgtttatcgatcgcatcagggcgctccccttgatccttggc
tttggcgcgcaggatcggattacgcgccagcttgccgaggcgacacaggaggtcgcccgg
cgcaccgtcgcggttctgcgcatcgcctttctctccggggcgatcatcgagttctttgcc
gcgctgtccgttgcaatggtcgcggtctattgcggtttcaacctgctcgggctgctgccc
tttcccgtgcccgagacgctcgacctgagccgcgccctctatgtcctcatccttgcgcct
gaattctatctgccgatgcgccgcctggccgcagcctatcacgacaagcaggtcggtgaa
gcggcgctcgagcgtctggccgccctgactccggcgccggtggtcgccacgtcgccggtc
catatgctggcggctccgcctgccatccggttcgagtcagtcgttatagattatggcgaa
cgaagagtgggaccgatctcgatgcacatcgccgccggctgcgtgacggcgctctcgggt
acgaccggaacgggcaagtcgagcctgctccacgcgctgttggggctggcgccggtggtc
gcgggcgatatccttctcgacggacgcccactctcgccggaggcgctgcgcggggaggtc
agttgggccggtcaggcgacggcgctcgtgctgggaagcctggccgacaatatccgcctg
gcgcgtccccatgcgagcgacgcggaggtcgaggatgtcgcgcggcgcgcgggactgacc
gaggtcgtgcagacccgaggggcgggccttgcaaccctcatcgacccacgcggatcgggc
ctctcgggcggcgagcgccggcgcgtcggtatcgcgcgggcgctgctccgcgacgccccg
ctgtggctcctcgatgaacccaccgccgatctcgacgaaggctccgcgatggaactggcc
cggcacatagtcgaggcgggcagggggcgcacggttttcctcgtcacccatagcgccgcg
atcgctgcattggccgatcatcgcgtggtgctctcatga
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