Sphingobium sp. AntQ-1: sphantq_00852
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Entry
sphantq_00852 CDS
T10291
Symbol
groL5
Name
(GenBank) 60 kDa chaperonin 5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sphantq_00852 (groL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spag03019
]
sphantq_00852 (groL5)
03110 Chaperones and folding catalysts [BR:
spag03110
]
sphantq_00852 (groL5)
03029 Mitochondrial biogenesis [BR:
spag03029
]
sphantq_00852 (groL5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spag04147
]
sphantq_00852 (groL5)
Enzymes [BR:
spag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
sphantq_00852 (groL5)
Messenger RNA biogenesis [BR:
spag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
sphantq_00852 (groL5)
Chaperones and folding catalysts [BR:
spag03110
]
Heat shock proteins
HSP60 / Chaperonin
sphantq_00852 (groL5)
Mitochondrial biogenesis [BR:
spag03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
sphantq_00852 (groL5)
Exosome [BR:
spag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
sphantq_00852 (groL5)
Exosomal proteins of other body fluids (saliva and urine)
sphantq_00852 (groL5)
Exosomal proteins of breast cancer cells
sphantq_00852 (groL5)
Exosomal proteins of colorectal cancer cells
sphantq_00852 (groL5)
Exosomal proteins of bladder cancer cells
sphantq_00852 (groL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WCP12453
LinkDB
All DBs
Position
1:complement(869931..871577)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVIKVVEDIKARSKPVSGSAEVAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMSVELADPYILIHEKKLSNLQSILPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
ISEDLGIKLESVTLGMLGTAKRVTIDKDNTVIVDGAGDHDSIKGRTEQIRQQIEHTSSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALNGLTGVNDDQTRGIDIVRKSLTALVRQIASNAGHDGAVVSGKLLDQDDTSFGFN
ASTDVYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPADDKAPMGMPGGGM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaggacgtaaagttttcgcgtgacgctcgtgagcgcatcctgcgcggcgtc
gacattctggccgacgcggtcaaggtgaccctggggccgaagggccgcaacgtcgtcatc
gacaagagcttcggcgcgccccgcatcaccaaggacggcgtcagcgtcgccaaggaaatc
gaactgaaggacaagttcgaaaatatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgtgctggcccaggccatcgtg
cgcgagggcatgaagtcggttgccgccggcatgaacccgatggacctgaagcgcggcatc
gaccttgccgtcatcaaggtcgtcgaggacatcaaggcgcgttcgaagccggtttcgggt
tcggccgaagtcgcccaggtcggcatcatctccgccaatggcgatcgtgaagtcggcgag
aagatcgccgaagcgatggaaaaggtcggcaaggaaggcgtcatcaccgtggaagaggcc
aagggtctcgacttcgagctggatgtcgttgaaggtatgcagttcgaccgcggctacctg
tcgccctacttcatcaccaacccggaaaagatgtcggttgaactggctgacccgtacatc
ctgatccacgaaaagaagttgtcgaacctgcagtcgatccttcccatcctggaagccgtc
gttcagtcgggccgtccgcttctgatcatcgcagaagacatcgaaggcgaagcgctggcg
accctggtcgtcaacaagctgcgcggtggcctgaaggtcgctgcggtcaaggcgcctggc
ttcggcgaccgccgcaaggctatgctggaagacatcgccgtcctgaccaagggcgaagtg
atctccgaagatctgggcatcaagcttgagtccgtcacgctgggtatgctgggcaccgcc
aagcgcgtcaccatcgacaaggacaacaccgtcatcgtcgatggcgctggcgaccatgac
tcgatcaagggccgcaccgagcagatccgtcagcagatcgagcacaccagctcggactat
gaccgtgaaaagctgcaggagcgtctggccaagctggctggcggcgtggccgtcatcaag
gtcggcggcgcgacggaagtcgaagtcaaggagcgcaaggatcgcgtcgacgacgctctc
catgcaacccgcgccgctgtcgaagaaggcatcgtccccggtggcggtacggctctgctg
tacgcgaccaaggcgctcaatggcctgacgggcgtcaatgacgaccagacccgcggcatc
gacatcgtccgcaagtcgctcaccgctctggtgcgccagatcgccagcaatgcgggccat
gacggcgccgtcgtgtcgggcaagctgcttgaccaggacgacacctcgttcggcttcaat
gcatcgaccgacgtgtatgaaaacctggtcgcggccggcgtgatcgaccccaccaaggtc
gtccgcaccgcgctgcagaacgctgcctcggtcgccggcctgctcatcacgacggaagcc
gccgtgtccgaactgcccgccgacgacaaggcgccgatgggtatgcccggcggtggcatg
ggcggcatgggcggcatggacttctaa
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