Sphingobium sp. AntQ-1: sphantq_00863
Help
Entry
sphantq_00863 CDS
T10291
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spag Sphingobium sp. AntQ-1
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spag03016
]
sphantq_00863 (truB)
Enzymes [BR:
spag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
sphantq_00863 (truB)
Transfer RNA biogenesis [BR:
spag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
sphantq_00863 (truB)
Prokaryotic type
sphantq_00863 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WCP12464
LinkDB
All DBs
Position
1:complement(883160..884197)
Genome browser
AA seq
345 aa
AA seq
DB search
MHGWIILDKPHGLGSTQAVSAVKRALRISEAGKWKVGHGGTLDPLATGVLPIAIGEATKL
AGRMLDSDKIYDFTVAFGVQTDTLDLEGKGIAQSDVRPTLAQVQAVLPRFTGPIEQAPPA
YSAILIDGQRAYDLARKGEEVEMKRRSVTIHGLHISSSQGAEDSGVCPQGGLAQLGAGER
EAGPAPTSARQQAAKPSYPLPHGERVSEITLRAHVSKGTYIRSLARDIALALGTVGHVTM
LRRVKAGPFTLESAISLDKLDQAARGGGIGGLMLPLTAGLDDIPALPVSPDQAIALRQGK
ILTGIAATDGQYLATLGDIPVALVRSDDHQIVVVRGFNLMSREDD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcacggttggatcatcctcgacaaaccccatggcctgggttcgacccaggcggtcagc
gcggtcaagcgcgcgctgcggatcagcgaggcgggcaagtggaaggtcggccatggcggc
acgctcgatccgctggcgaccggggtgctgccgattgcgatcggggaagcgaccaagctg
gcgggccggatgctcgacagcgacaagatttacgattttacggtcgctttcggtgttcag
accgacacgctggacctggagggaaagggaatcgcgcagagcgacgtgcgcccgacgctg
gcgcaggtgcaggcggtcctgccgcgcttcaccggaccgatcgagcaagcgccgccggcc
tatagcgcgatcctgatcgacggccagcgcgcctacgacctcgcccgcaaaggggaagag
gtcgagatgaagcggcggtcagtgacgatccatgggctgcatatatcctcgtcccagggg
gcagaggatagcggagtttgtccgcagggcgggctagcgcagcttggagcgggggagcga
gaggcaggccccgctccaacttcggccaggcagcaagctgccaagccttcatatcctctc
ccccatggggagagggtttcagagatcacccttcgcgcccacgtctccaagggcacttac
atccgctccctggcccgcgacatcgcgctggcgttgggaacggtcggccatgtcaccatg
ctgcgccgggtgaaggcagggccgttcaccctcgaatccgcaatttcgctggacaaattg
gaccaagctgctaggggcggcggcatcggtgggcttatgctgccgctgacggcggggctg
gacgacatcccggctctccccgtctctcccgatcaggccatcgctctccgccaggggaag
atactgaccgggatcgccgccaccgacggccagtatctggcgacattgggcgatatcccc
gtggcgctggtgcggtcggacgatcatcagatcgtcgtggtgcgcggtttcaacctgatg
tcgagggaagacgattag
DBGET
integrated database retrieval system
