Sphingobium sp. AntQ-1: sphantq_01021
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Entry
sphantq_01021 CDS
T10291
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spag Sphingobium sp. AntQ-1
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_01021 (radA)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
sphantq_01021 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
DnaB_C
RecA
Lon_C
AAA_22
AAA
NACHT
AAA_30
DUF7125
NTPase_1
nSTAND3
Glyco_hydro2_C5
AAA_5
PAXNEB
MeaB
SLFN-g3_helicase
AAA_29
Rad51
DUF7129
AAA_14
AAA_24
DAP3
Motif
Other DBs
NCBI-ProteinID:
WCP12619
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All DBs
Position
1:complement(1036799..1038166)
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AA seq
455 aa
AA seq
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MAKAKRKFVCQQCGAVAARWQGQCEDCGEWNSIVEEAAETVFSSRHDLQNGGRAIALIGL
DSKVELPPRTSTGIAEFDRALGGGIVAGSATLIGGDPGIGKSTLLLQAAARVAARGLSVA
YISGEEATDQVRLRAQRLGLGNAPVMLASATSVRDILTTLSEGPPPALLVIDSIQTMHSD
LIEGAPGTVSQVRASSQELIKFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVLAFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTQRDETVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALVSALSEKPLPSDVILFGEIALSSEIRPVAHAPLRLREAAKLGF
NRAFLPAAAADGVKGIAVSGFRTLAQLVDQMLGRG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaagcgcaaattcgtctgtcagcaatgcggcgccgtcgcggcccgctgg
cagggccagtgcgaggattgcggcgagtggaacagcatcgtcgaggaagcggccgaaacc
gtcttctcctcgcgccacgatctgcaaaatggcggccgcgcgatcgcgctgatcggcctc
gacagcaaggtcgaactgccgccgcgcaccagcaccggcatcgcggagttcgaccgggcg
ctgggcggcggtatcgtcgcgggctccgcgacgctgatcggcggtgatccgggcatcggc
aaatcgaccctgctgttgcaggcagcggcgcgggtcgccgcgcgcggtctatcggtggcc
tatatcagcggcgaggaagcgaccgaccaggtccgcttgcgcgcgcagcgactgggcctg
ggcaatgcgccggtcatgctcgccagcgcgacgtcggtgcgcgacatcctgacgaccctg
agcgaagggccgccgcccgccctgctggtgatcgattcgatccagaccatgcatagcgac
ctgatcgagggcgcgccgggcaccgtcagccaggtccgggcctcgtcccaggaactcatc
aaattcgccaagcagcgcggcaccgcgctgatcctggttggccatgtgaccaaggatggc
agcatcgccggcccgcgcgtactggaacatatggtcgacaccgtgctggcgttcgaaggg
gagcgcagtcaccaatatcgcatcctgcgcgcgatcaagaaccgcttcggcggcacggac
gagattggcgtcttcgccatggtggccgaggggctggaggaagtcgccaacccctcggcc
ctgttcctgacccagcgcgacgagacggtgacgggcgcgaccgtctttcccgcgctggaa
gggacgcggccggtgctggtcgaaatccaggcgctggtcgtgcgcctgtcgagcggcgcc
acgccccggcgtgcggtggtcggctgggacagcgggcggctggccatggtgctggccgtg
ctggaggcgcgctgcggcctcagcttctcgacctgcgaagtctatctgaacgtcgcgggc
ggctatcgcctgtccgatcccgccgcggacttggccgtcgccgccgctctggtgtcggcc
ctgtcggaaaagccgttgccgtcggacgttatcctgttcggcgagattgcgctatcgagc
gaaatccgccctgtcgcccatgccccgctgcggctgcgcgaagcggccaagctcggcttc
aaccgcgctttcctccccgccgccgcggccgacggggtgaagggaatcgcggtcagtggt
ttccgtaccctcgcgcagcttgttgaccagatgctgggacgcggatag
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