Sphingobium sp. AntQ-1: sphantq_01352
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Entry
sphantq_01352 CDS
T10291
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03030
DNA replication
spag03410
Base excision repair
spag03420
Nucleotide excision repair
spag03440
Homologous recombination
Brite
Enzymes [BR:
spag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
sphantq_01352 (polA)
DNA replication proteins [BR:
spag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
sphantq_01352 (polA)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
sphantq_01352 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
sphantq_01352 (polA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WCP12939
LinkDB
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Position
1:1375048..1377828
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AA seq
926 aa
AA seq
DB search
MTQNHLYLVDGSGYIFRAYHQLPPLTNQHGQPVGAVYGYTTMLWKLAEELGKAEGPTHMA
VVLDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
TYTRAAVAAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGPDYVMGKFGVQPEQLGDV
LALMGDSVDNVPGVPGIGPKTASKLITEYGDLESVLTAAPAMKKSKMQENLIAHADMARL
SRRLVALHDSMDLPEPLDDLTLKGIPKEPLQQFLSHHGFKTLLNRLGAPAAAVAVASVAA
TTAAPAAPAAVEHPPIDCALYETVTTVAQLEAWIAEAQALGVVAVDTETDSLDSMESGLV
GISLSTGPGRACYIPLAHRSADDMFGEVPPQIPLDAAIRLLRPLLADDAVLKVGHNIKYD
LNVLARVGLEVTPIDDSMVMSFDLDAGKSLGGHGMDEAASVHLQHTCISFKEVTGTGKKA
ISFAHVPLDKATAYAAEDAEVTWRLWHKLSQRLAAERVTRVYQLVDRPLIPVVAGMERHG
IKVDREQLSRLSGTFSQSMAGLEAEIYELAGHPFTIGSPQQLGVVLFDEMGLKGGKKGKS
GTYSTDVTVLEKLKAEGSAICGLVLEWRQLSKLKSTYTDALQQQINADTGRVHTSYSLTG
AQTGRLSSTDPNLQNIPIRTEIGRQIRHAFVAEPGNVILAADYSQIELRLAAHMADVPAL
KEAFEQGEDIHNRTAQELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEISADEAQDM
ISKYYERFPGISVYINETLEKARANGFTETLFGRKTWFPRITAPIQHERQGAERAAINAP
IQGTSADIIKRAMARMGPALEAAGLHRVRMLLQVHDELVFELPQGDVEAASAVIRSVMES
AAEPIVTLSVPLGVEIGAGPSWGAAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaatcacctctatctcgtcgatggcagcggctatatcttccgcgcctatcac
cagcttcccccgctcaccaatcagcatggccagccggtcggcgccgtctatggctacacc
accatgctctggaagctggccgaggaactgggcaaggcggaaggcccgacccatatggcg
gtcgtgctggacaagggatcgcacactttccgcaacgacatgtacgaccagtataaggcg
aaccgaccgcccgcgcccgaagacctcgtcccccagttccccatgatccgagacgccacc
cgcgccttctccctcccctgtatcgaagaagccgggttcgaggcggacgacatcatcgcc
acctataccagggcggcggtcgcggccggctggcacgtcaccatcgtcagttccgacaag
gatctgatgcagttgatccagcctggcgtcgacatgtacgacacgatgaagaatgaacgg
cgtgggccggactatgtcatgggcaagttcggcgtgcagcccgaacaattgggcgacgtg
ctggcgctgatgggcgacagcgtcgacaatgtgccgggcgtgccgggcatcggccccaag
accgcgtcgaagctcatcaccgaatatggcgacctggaaagcgtgctgaccgccgcgccg
gccatgaagaagtcgaagatgcaggaaaacctcatcgcccatgccgacatggcgcggctg
tcgcggcggctggtggcgctgcacgacagcatggacctgcccgaaccgctggacgacctg
acgctcaagggcattcccaaggaaccgctccagcaatttctgtcccaccacggcttcaag
acgctgctcaatcgcctcggcgcgcccgccgccgccgtcgcagtagccagcgtcgccgcc
acgaccgcagcccccgccgccccagccgctgtcgaacatcccccgatcgactgcgccctg
tacgaaaccgtcaccacggtcgcgcaactggaagcctggatcgccgaagcgcaggcgctg
ggcgtcgttgcggtcgacaccgaaaccgacagcctcgacagcatggaatcgggcctggtc
ggcatcagcctgtccaccgggccgggccgggcctgctacatcccgctcgcccaccgctcc
gccgacgacatgttcggcgaggtgccgccgcaaatcccgctcgacgccgcgatccgcctg
ctccgcccgctgctcgccgacgacgccgtgctcaaggttggtcataatatcaaatatgat
ctcaacgtcctcgcccgcgtcgggctggaggtgacgccgatcgacgattcgatggtgatg
agcttcgacctcgacgccggcaagtcgctgggcggccacggcatggacgaagcggccagc
gtccatctccagcacacatgcatcagcttcaaggaggtgaccggcaccggcaagaaggcg
atcagtttcgcccatgtcccgctggacaaggcgaccgcctacgccgccgaggacgccgaa
gtcacctggcggctgtggcataaattgtcgcagcgcctggcggccgagcgcgtcacccgc
gtctatcaactggtcgaccggccgctgatccccgtcgtcgcaggcatggagcggcacggc
atcaaggtcgatcgcgagcagctctcccgcctgtccggcaccttctcccaatcgatggcg
gggctggaagccgaaatctacgaactggccggccaccccttcaccataggatcgccccag
cagcttggcgtcgtcctgttcgacgaaatggggctgaagggcggcaagaagggcaagagc
ggcacctattccaccgacgtcaccgtgctggaaaaattgaaggccgaaggctcggcgatt
tgcgggctggtgctggaatggcgccagctctccaagctcaaatccacctataccgacgcc
ctgcaacagcagatcaatgccgatacgggccgcgtccataccagttactcgctgaccggc
gcgcagaccggccgcctctcctcgaccgaccccaacctccagaatatcccgatccgcacc
gaaatcggccgccagatccgccacgccttcgtcgccgaacccggcaatgtcatcctcgcc
gccgactatagccagatcgagctgcgcctcgccgcgcacatggccgacgtgcccgcgctc
aaggaggcgttcgaacagggcgaggacatccacaaccgcaccgcccaggaattgttcgga
gaggtcaatcgcgacacccgcggtcgcgccaagacgatcaacttcgccattctttatggc
atctcgcgctgggggctggcgggccggctggaaatcagcgcggacgaagcgcaggacatg
atctccaaatattatgagcgcttccccggcatcagcgtctatatcaacgaaacgctggaa
aaggcgcgcgccaacggcttcaccgaaacgctgttcggccgcaagacctggttcccgcgc
atcaccgcgccgatccagcacgaacgccagggagccgaacgcgccgcgatcaacgccccg
atccagggcaccagcgccgacatcatcaaacgcgccatggcgcgcatgggaccggcgctg
gaggcggcagggctgcaccgcgtgcggatgctgcttcaggtccatgacgaactggtgttc
gaactgccgcaaggcgacgtcgaagccgccagcgcggtcatccgcagcgtcatggaaagc
gccgccgagccgatcgtgacactgagcgtgccgctaggcgtggaaatcggtgccgggccg
agttggggtgctgcgcattga
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