Sphingobium sp. AntQ-1: sphantq_01599
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Entry
sphantq_01599 CDS
T10291
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sphantq_01599 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spag03021
]
sphantq_01599 (rpoA)
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_01599 (rpoA)
Enzymes [BR:
spag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sphantq_01599 (rpoA)
Transcription machinery [BR:
spag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
sphantq_01599 (rpoA)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
sphantq_01599 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
WCP13181
LinkDB
All DBs
Position
1:1609053..1610114
Genome browser
AA seq
353 aa
AA seq
DB search
MTVNMKNWQELKKPNALEIKPTSDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNIKQVALRMEGEGPKRLQLSATGPAVVKAGDI
SVVGDIEVMNPELVICHLDQGATLNMELTADIGKGYVPAVANRPADAPIGLIPIDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTIETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
AAAPAAGHTAATASEGESDTNQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacgccctcgaaatcaag
ccgaccagcgacggcaagcgcaaggcgaccttcgtcgccgaaccgcttgagcgtggtttc
ggcctgacgctcggcaatgcgttgcggcgggttcttctttcctcgctccagggcgcggcg
gtcacctcgatcaagatcgagaacgtcctgcatgaattctcgtcgctcgccggcgtccgc
gaagacgtgaccgacatcgtcctcaatatcaagcaggtcgcgctccgcatggaaggcgaa
ggccccaagcggctgcagctgtccgccacgggcccggccgtggtgaaggcgggcgatatc
agcgtcgtgggcgacatcgaagtgatgaaccccgaactggtcatctgccatctggaccag
ggcgcaacgctcaacatggaactgacggctgacatcggcaagggttatgtccccgccgtc
gccaaccgcccggcggacgcccctatcggcctcattccgatcgatgcgctctactcgccg
gtccgtcaggtcgcctacaaggtggacaatacccgcgtcggccaggaactggactatgac
aagctgtcgctgaccatcgaaaccgatggcaccgtcacgccggaagacgcggtggcctac
gccgcccgtatcctgcaggaccagctccagctgttcgtccacttcgaagacgcgctgccc
gccgctgcgcctgctgcgggtcacaccgccgctacggcttcggaaggcgaaagcgacacc
aaccagatcaaccgctatcttctcaagaaggtggacgaactggaactgtcggtccgctcg
gccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagaccgaa
gccgagatgctgcgcacccccaatttcggccgcaagtcgctgaacgaaatcaaggaagtg
ctgtcgtccatgggcctgcgcctgggcatggacatccctggctggccgccggagaatatc
gaggaaatggccaagaagctcgaacaggagctgctgggttaa
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