Sphingobium sp. AntQ-1: sphantq_01636
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Entry
sphantq_01636 CDS
T10291
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag00541
Biosynthesis of various nucleotide sugars
spag01100
Metabolic pathways
spag01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
sphantq_01636 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spag01005
]
sphantq_01636 (kdsA)
Enzymes [BR:
spag01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
sphantq_01636 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
spag01005
]
Lipid A
sphantq_01636 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WCP13217
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Position
1:1651121..1651957
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AA seq
278 aa
AA seq
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MTAMTNPKHVTAGPITFGNDLPFVLISGPCQIESRDHALFMADALAKTADKAGVPFIFKS
SFDKANRTSISGRRGVGIDAGLAILADVKATLGCPVLTDIHGPEQVEAAAQAVDILQIPA
FLCRQTDLLLAAGRTGAIINVKKGQFLAPWDMAAVAQKVASTGNDRILLTERGASFGYNS
LVSDMRALPTMAQTGYPVIFDATHSVQQPGGLGTASGGQREFAPLLARSAVAAGVGAIFA
EAHDDPDNAPSDGPVMLPLDWVGPMLEKLKAIDEVVKG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatgaccaatcccaaacatgtgaccgcagggcctatcaccttcggcaacgac
ctgcccttcgtcttgatttccggcccctgccagatcgaaagccgcgaccatgcgctgttc
atggccgatgcgctggccaagacggccgacaaagcgggcgtgcccttcatcttcaaatcc
tccttcgacaaggcgaaccggacgtcgatatcgggccgacgcggcgtcggcattgacgcg
gggctggcgattctggcggacgttaaggcgacgcttggctgcccggtgctgaccgacatc
catggtcccgaacaggtcgaagccgcggcgcaggcggtggatatcctgcaaatccccgcc
ttcctctgccgccagaccgacctgctgctcgccgccgggcgcaccggggcgatcatcaac
gtgaaaaagggccagttcctcgcgccctgggacatggcggcagtggcgcagaaagtcgcc
tccaccggcaacgaccgcatcctgctgaccgaacgcggggcgagcttcggctacaacagc
ttggtcagcgacatgcgcgcgctgccgaccatggcccagaccggctatccggtgatcttc
gacgccacccattcggtgcagcagcccggcggtctaggcaccgcatcgggcggccagcgc
gaatttgcgccccttctggcccgcagcgcggtggcggcaggcgtcggcgcgatcttcgcc
gaagcacatgacgatcccgacaacgcgccctccgacggcccggtgatgctgccgctggac
tgggtggggccaatgttggagaagctcaaggcgatcgacgaggttgtgaagggataa
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