Sphingobium sp. AntQ-1: sphantq_02348
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Entry
sphantq_02348 CDS
T10291
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
sphantq_02348 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spag01007
]
sphantq_02348 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spag03016
]
sphantq_02348 (lysS)
Enzymes [BR:
spag01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
sphantq_02348 (lysS)
Amino acid related enzymes [BR:
spag01007
]
Aminoacyl-tRNA synthetase
Class I (A)
sphantq_02348 (lysS)
Transfer RNA biogenesis [BR:
spag03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
sphantq_02348 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WCP13909
LinkDB
All DBs
Position
1:2348310..2349905
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AA seq
531 aa
AA seq
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MTMSDILRTAATASKAWPYEEARKLVKRYKLDEKEGGAPDKGHILFETGYGPSGLPHIGT
FNEVLRTTMVRNAFHALSDIPTRLVAFSDDLDGFRKVPDNVPNQAMLAEYLGKPLTQVPD
PFEEHESFAHHNNARLRAFLDSFGFDYEFVSATERYQAGAFDGALRQVLRRYQAIMDIML
PTLRKERQATYSPVLPISPKSGIVLQVPVEVIDAETGIVRFVDEGETIEQSILGGAAKLQ
WKVDWAMRWYALGVDYEMAGKDLIDSVTQSSKICRALGGRPPEGFNYEMFLDEKGEKISK
SKGNGLSLEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRGNYAKQAVEQ
QLGNPVHHIHDGQLPQGELPVTFGLLLNLVGVMGDASREQVWSYLQNYAPGASAQTYPEL
DALIGHALAYHRDFVAPTLRRRAPDVNEAAALRQLDKELAALPTSASAEDIQNIVYAIGK
DETFGFAELRNWFKALYQTLLGADQGPRMGSFIALYGIENSRKLIAQALAA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtccgacatcctccgtaccgccgcgaccgcatccaaggcctggccttatgaa
gaagcccgcaagcttgtgaagcgctacaagcttgacgagaaagagggcggcgcgccggac
aaggggcatatcctgttcgaaaccggctatggcccatcgggcctgccgcacatcggcact
ttcaacgaagtgttgcgcacgaccatggtccgcaacgccttccatgcgctgtcggatatt
cccacccggctggtggcgttcagcgacgatctggacgggttccgcaaggtgccggataat
gtgccgaaccaggcgatgctggccgaatatctgggcaagccgctgacgcaggtgcccgat
ccgttcgaagagcatgaaagctttgcgcatcataataatgcgaggctgcgggcgttcctc
gacagtttcggtttcgactatgaattcgtgtcggcgacggagcggtatcaggccggtgcg
ttcgatggggcgctgcgccaggtgctgcgtcgctatcaggcgatcatggacatcatgctg
ccgaccctgcgcaaggaacggcaggcgacctattcgcccgtcctgccgatcagcccaaag
agcggtatcgtgttgcaggtgccggtggaggtgatcgacgccgaaacgggcattgtgcgc
tttgtggatgagggcgagacgatcgaacagtcgatcctgggcggcgcggccaagctgcaa
tggaaggtcgactgggcgatgcgctggtatgcgctgggcgtcgattatgaaatggcgggc
aaggatctgatcgattcggtgacccagtcgtccaagatttgccgtgcgctgggcggccgc
ccgcccgaaggcttcaactatgagatgttcctcgacgaaaagggcgagaaaatctccaag
tccaagggcaatggcctcagcctcgaacaatggctgacctacggcccgcaggaaagtctg
gccttctacgcctatcgcgagccgaagaaggcgaagcagctccacatgggcgtcatcccg
cgcgcggtggacgaatattggcagttccgcggcaattacgcgaagcaggcggtcgaacag
caactgggcaacccggtgcatcatatccatgatggccagttgccgcagggcgaattgccg
gtgactttcggcctgctgttgaacctggtcggcgtgatgggcgatgccagccgcgaacag
gtgtggtcctatctgcaaaattacgcgcccggcgccagcgcgcaaacctatcccgaactg
gacgcgctgatcggccatgcgctggcctatcaccgcgatttcgtcgcgccgaccctccga
cgtcgcgcgccagacgtcaatgaggcagcggcgttgcgccaactggacaaggaactggcc
gcgctgccgacaagcgcatcggccgaagatatccagaatatcgtctatgccatcggcaag
gacgagacgtttggttttgccgaactgcgcaactggttcaaggcgctctaccagacgttg
ctgggcgcggatcagggaccgcgcatgggcagtttcattgcgctgtacggcatagaaaac
agccgcaagctgatcgcgcaggcgcttgccgcctga
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