Sphingobium sp. AntQ-1: sphantq_02459
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Entry
sphantq_02459 CDS
T10291
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sphantq_02459 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spag03021
]
sphantq_02459 (rpoZ)
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_02459 (rpoZ)
Enzymes [BR:
spag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sphantq_02459 (rpoZ)
Transcription machinery [BR:
spag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
sphantq_02459 (rpoZ)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
sphantq_02459 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
WCP14017
LinkDB
All DBs
Position
1:2468298..2468642
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVTNRFDLVLLAAQRAREISGGAELTLDRDRDKNPVVALREIAEETVLP
ADLHDSVVASLQKVQIDDDDTPDEIGSIAQSAEALRLTAAAPPRNQNIGGDYDG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgcgttaccgtcgaagattgcgtcgacaaggttaccaaccgttttgacctcgtc
cttctcgccgcccagcgcgcgcgggagatttccggcggcgctgagttgacgctcgaccgc
gaccgggacaagaatccggtcgtcgccctgcgcgagatcgccgaggaaaccgtcttgccc
gccgatctgcacgattcggtcgtcgcgtcgctgcaaaaggtgcagattgacgatgacgat
acgccggacgaaatcggctcgatcgcccagtcggcggaggctctgcgcctgaccgccgcc
gcgccgccgcgcaaccagaatatcggcggcgattacgacggctga
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