Sphingobium sp. AntQ-1: sphantq_02617
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Entry
sphantq_02617 CDS
T10291
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
sphantq_02617 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_02617 (mutM)
Enzymes [BR:
spag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
sphantq_02617 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
sphantq_02617 (mutM)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
sphantq_02617 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Gln-synt_N_2
PSMbeta
Motif
Other DBs
NCBI-ProteinID:
WCP14173
LinkDB
All DBs
Position
1:2622236..2623048
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AA seq
270 aa
AA seq
DB search
MPELPEVETTVAGLRAVLQGAVLTRVEARRADLRWPIPVDLRQRMTGATVTGLSRRAKYG
LIETDRGDMMIFHLGMSGRWRIDPTEIGAHDHLLIETGHGHVLSLNDPRRFGSLDLVRSD
AWQAYTPFTRMGPEPLGPDFDTTRLAAALKGKATSIKAALLDQRIVAGLGNIYVCEALNM
AGIAPTRAAGKIGRVRLGLLVEAIRDVLSAAIVAGGSTLRDYARPDGELGYFSKQWRVYG
REGESCLCGGTVQRRVDGGRSTFFCPKCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaagtcgaaacaaccgtcgctggcctgcgcgccgtccttcagggg
gctgtgctgacgcgggtggaggcacgccgcgccgacctgcgctggccgatcccggtcgac
ctgcgtcagcggatgaccggggcgacagtgacggggctgtcacgccgcgccaaatatggc
ctgatcgaaaccgatcgcggcgacatgatgatcttccacctcggcatgtcgggtcgctgg
cgaatcgatccgacggagatcggcgcgcacgaccatctgctgattgagacagggcatggc
catgtgctgtcgctcaacgacccgcggcgattcggttcgctggacctggtgcgatcggac
gcatggcaggcctacacgcccttcacccgcatggggccggaaccgctgggaccggacttc
gacaccacccgcctggccgccgcgctcaagggcaaggcgacctcgatcaaggcggccttg
ctcgaccaacgaatcgtcgccgggctgggcaatatctatgtgtgcgaagcgctgaacatg
gcgggcatcgccccgactcgcgcggcgggcaagatcgggcgcgtgcgcctcggcctgctg
gtggaggcgattcgcgacgtgctgtccgccgccatcgtcgcgggcggctcgaccctgcgc
gattatgcgcggcccgacggggaattgggctatttctccaaacaatggcgcgtctatggg
cgggaaggcgaatcctgcctgtgcggcggcacggtacagcgccgggtggatggcggccga
tcgaccttcttctgccccaaatgtcagaaatag
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