Sphingobium sp. AntQ-1: sphantq_02718
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Entry
sphantq_02718 CDS
T10291
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag00300
Lysine biosynthesis
spag00470
D-Amino acid metabolism
spag01100
Metabolic pathways
spag01110
Biosynthesis of secondary metabolites
spag01120
Microbial metabolism in diverse environments
spag01230
Biosynthesis of amino acids
Module
spag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
sphantq_02718 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
sphantq_02718 (dapF)
Enzymes [BR:
spag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
sphantq_02718 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WCP14274
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Position
1:complement(2735758..2736540)
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AA seq
260 aa
AA seq
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MHGLGNDFVVIDARDGAVEMTEARARAVADRHAGIGCDQLILIGNAPDADVSMQIFNADG
SEVEACGNATRCVPLFVGRDVLIRTKAGLLDAKSVDGGASVDMGAPRFDWDAIPLAYPMD
TLTMSASWEELPAPAAVNVGNPHVIFFVDHLDGVNFDRLGPLIEHDPLFPARVNVNFAQV
VGDDHLRLVVWERGAGLTRACGTGACATAVAAVRRKLVTGPVTVSLPGGDLVIDWAPGGT
IRMTGPATHVFDGEADWDRF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcctgggcaatgatttcgttgtgatcgacgcgcgcgatggcgcggtcgagatg
acggaagcgcgcgcccgcgccgtcgccgatcgacacgccgggatcggctgcgatcaattg
atcctgatcggcaacgcccccgacgcggacgtgtcgatgcagatattcaacgccgacggc
agcgaagtggaagcttgcggcaacgcgacccgctgcgtgcccctgttcgtcggccgcgac
gtgctgatccgcaccaaggccggcctgctcgacgccaagagcgtggatggcggcgccagc
gtcgatatgggcgcaccccgtttcgactgggacgcgatcccgctcgcctatcccatggac
acgctgaccatgagcgcgagttgggaagagctgcccgcccccgccgcggtcaatgtcggc
aacccgcatgtcatcttcttcgtggaccatctggacggtgtgaacttcgaccgtctcggc
ccgctgatcgagcatgatccgttgttcccggcgcgcgtgaacgtcaatttcgcgcaggtc
gtgggcgacgatcatctccgtctggtggtatgggaacgcggcgcggggctgacgcgcgcc
tgcggcacgggcgcctgcgccaccgccgtcgccgccgtccgccgcaagctggtgacgggg
ccggtgacggtcagtctgccgggcggcgatctggtgatcgactgggcgccgggcggcacg
atccgcatgaccggacccgccacccatgtcttcgacggtgaggctgactgggaccgcttc
tga
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