Sphingobium sp. AntQ-1: sphantq_02992
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Entry
sphantq_02992 CDS
T10291
Symbol
pbpF
Name
(GenBank) Penicillin-binding protein 1F
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag00550
Peptidoglycan biosynthesis
spag01100
Metabolic pathways
spag01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
sphantq_02992 (pbpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
sphantq_02992 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spag01003
]
sphantq_02992 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spag01011
]
sphantq_02992 (pbpF)
Enzymes [BR:
spag01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
sphantq_02992 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
sphantq_02992 (pbpF)
Glycosyltransferases [BR:
spag01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
sphantq_02992 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
spag01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
sphantq_02992 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WCP14546
LinkDB
All DBs
Position
1:complement(2990520..2992547)
Genome browser
AA seq
675 aa
AA seq
DB search
MPDSAPRDPFAQPPREFGAGPPSAFARPTPWRRRLQITGWVIAAGLAVLMILVAWLAVTA
PLSRSLKPIAPPSISLTSADGHLIARRGAVIDRPVTMAELPAHVPQAFMAIEDRRFMTHW
GVDPRGIARAMWHNLWSDGSSQGGSTITQQLAKGVFLSSDRTFGRKAREALIALWLEAWL
TKDQIMERYLSNVYFGDNVYGLRAAALHYFNRAPERLTIPQAAMLAGLLKAPSRLAPTSN
LKGARARAALVTQAMVDAGYLAQAERNALPPARLNVHDTPDATTGTYFADWVLADARDRA
GAVYGEQKIETTLDWRIQRLAEAAIRRAPLGGAQAALVAMKPDGSVVAMVGGKNYAKSSF
NRAVQAKRQPGSTFKLFVYLAAFRAGMTPDDMIDDTPITTGAYRPANHGGKYRGRITLRQ
AFAASSNVAAVRLTQKVGVDNVIKVVRDLGVTAPLTEDLSLALGTSEIPLVELAEAYAAV
AAGAYPVLAHGLPPEEQRWFEKLMQRQRQFSQDQLDMIRDLLSSAANRGTGSAAALRTST
FGKTGTTQDSRDAIFVGYAGGLVTAVWIGNDDNAPLPGGAAGGGVPARIWRNFMSGAINE
PVEDAPEETQDADLVNAIANVTVETGIGNVGLGVDEGGMTVNIGGGPIRLPIAPSGTPPP
RIAPTQLDEGEDSGP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccgccccacgcgatcccttcgcgcaacctccgcgcgagttcggcgcgggt
ccgcccagcgccttcgcacggcccacgccctggcgtcgccggcttcagatcaccggatgg
gtgatcgccgcaggcctcgccgtgctgatgattctggtcgcctggctcgcggtcacggca
ccgctctcccgctcgctcaagcccatcgccccgcccagcatcagcctgacgtcggcggac
ggccacctgatcgcccggcgcggcgcggtgatcgaccgtccggtgacgatggccgaactc
cccgcccatgtgccgcaggcgttcatggcgatcgaggatcgccgcttcatgacccattgg
ggcgttgatccgcgcggcatcgcccgcgcgatgtggcataatctctggtcggacggatcg
tcgcagggcggcagcaccatcacccagcaactcgccaagggcgtcttcctgtccagcgac
cgcaccttcggccgcaaggcgcgcgaggcgctgatcgcactctggctggaagcgtggctg
accaaggaccagatcatggagagatatctctccaacgtctatttcggcgacaatgtgtac
ggcctgcgcgccgcggcgctccactatttcaaccgcgcgcccgaacggctgaccatcccg
caggccgcgatgctggcggggctgctgaaggcgccctcccgcctcgcccctaccagcaac
ctgaaaggcgcgcgcgcgcgcgccgcgctggtgacgcaggcgatggtcgatgcgggctat
ctcgcccaagcggagcgcaacgccctgccccccgcccggctcaacgtccatgacacgccc
gacgccaccaccggcacctatttcgccgactgggtgcttgctgacgcgcgcgaccgcgct
ggggccgtctatggcgaacagaagatcgagaccacgctcgactggcgcatccagcgcctt
gccgaagccgccatccgccgcgcgccccttggcggcgcgcaggccgctttggtggcgatg
aagcccgacggcagcgtcgtcgccatggtcggcggcaaaaattacgccaagagcagcttc
aaccgcgcggtgcaggccaagcgtcaaccgggatcgacattcaagctgttcgtctatctc
gccgccttccgcgcggggatgacgcccgacgacatgatcgacgacacgcccatcaccacc
ggcgcctatcgccccgccaatcatggcggcaaatatcgcggccgcatcaccttgcgccag
gcgttcgcagcatcgagcaatgtcgcggccgtccgcctgacgcaaaaggttggcgtcgac
aacgtcattaaggtcgtccgcgacctgggcgtcacggcgccgctgaccgaggatctcagc
ctcgcgctcggcacatcggaaatcccgctggtcgaactggccgaagcctatgcggcggtc
gctgccggcgcctatccggtgctggcgcatggcctgccgcccgaagaacagcggtggttc
gaaaagctgatgcagcgccagcggcaattcagccaggatcagctcgacatgatccgcgac
ctcctctcctccgccgccaatcgcggcaccggcagcgcggcggcgctgcgcaccagcacg
ttcgggaaaacgggtacgacgcaggacagccgcgacgccatcttcgtcggctatgccggg
ggcctcgtgacggcggtgtggatcggcaatgacgacaatgcccccctgcccggcggcgcg
gccggcggcggcgtgcccgcgcgcatctggcgcaatttcatgagcggcgcgatcaacgaa
ccggtcgaggacgcgccggaggagacgcaggacgccgacctggtcaacgccatcgccaat
gtgacggtggaaaccggcatcggcaatgtcgggctgggcgtggacgaaggcggcatgacg
gtgaatatcggcggcgggccaatacgtttgccgatcgccccttcaggcacgccaccaccg
aggatagcgccgacgcagttggatgagggcgaggatagcgggccttaa
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