Sphingobium sp. AntQ-1: sphantq_03181
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Entry
sphantq_03181 CDS
T10291
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag00061
Fatty acid biosynthesis
spag00071
Fatty acid degradation
spag01100
Metabolic pathways
spag01212
Fatty acid metabolism
spag02024
Quorum sensing
spag04146
Peroxisome
Module
spag_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
sphantq_03181 (fadD)
00071 Fatty acid degradation
sphantq_03181 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
sphantq_03181 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
sphantq_03181 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spag01004
]
sphantq_03181 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spag04147
]
sphantq_03181 (fadD)
Enzymes [BR:
spag01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
sphantq_03181 (fadD)
Lipid biosynthesis proteins [BR:
spag01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
sphantq_03181 (fadD)
Exosome [BR:
spag04147
]
Exosomal proteins
Exosomal proteins of breast milk
sphantq_03181 (fadD)
Exosomal proteins of breast cancer cells
sphantq_03181 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WCP14732
LinkDB
All DBs
Position
1:3167072..3168778
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AA seq
568 aa
AA seq
DB search
MESIEKIWRERYQHPTAWDQTFPPLSMGDMVTNSATAHPDAPMIDFMGRHFSYGAMLEQI
RRIACGLQAMGVRKGDRVGLYLPNTPHYVAAYYGALMAGAIVVNFSPLYTAAELEHQVED
SGTKILFTLSAKALLPTALQVLDHSALETLIVGSVAEMLPPVKSLLFRWFKASESTPLPD
DPRIIRYDRLVANAGGCSVPEIDPVNDVALLQYTGGTTGTPKGAMLTHQNLTANARQAQA
IDPHANEPDRIIAVLPFFHVFANTCTLNRTVVNGGEMVMLPRFDAAQVLAAVQRVKATSL
PGVPTMFQALLDHPAIRNIDFSSLRACISGGAPLALELKQKFEAATGAKLIEGYGLTETS
PIVCTNPYEGLNKSGTVGQPVPGTRVKLVDREDPTRPPAEGEPGELLFAGPQIMKGYWNR
PDADAEVFVGDYVRTGDVGLVDEDGYVKIVDRLKDMIAVGGFKVFPSQVESVLYHHPAVK
EALVIGIPDHYRGEQPKAFVTLNEGAEMDGGALMDWLNPQLGKHERVCAVEVRLNLPKTL
VGKLSRKELVAEERAKADAARAEAGTAA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagagcatagaaaaaatctggcgagaacgctatcagcatcccacggcctgggaccag
acattccccccgttgtcgatgggcgacatggtcacgaacagcgcaacggcccaccccgac
gcgccgatgatcgatttcatggggcggcatttcagctatggcgcgatgctggagcaaatt
cgcaggatcgcctgcggcttgcaggccatgggcgtgcgcaaaggcgaccgggtcggcctc
tatctgcccaacaccccccattatgtcgcggcctattatggcgcgctgatggccggcgcg
atcgtcgtcaacttctcccccctctacaccgcggccgaactggaacatcaggtcgaagat
agcggcacgaagattttattcaccctgtcggccaaggcgctgctgcccaccgcgctgcag
gtgctggaccatagcgcgctggagacgctgatcgtcgggtcggtcgccgagatgctgccg
ccggtcaaatcgctgctgttccgttggttcaaggccagcgagtccacgcctttgccggac
gatccgcgcatcatccgctacgaccggctggtcgccaatgcgggggggtgttccgtgccg
gagatcgacccggtcaacgacgtcgcgttgctgcaatataccggcgggacgaccggcacg
cccaagggggcgatgctgacccatcagaatctgaccgccaatgcgcggcaggcgcaggcg
atcgatccgcacgccaatgagccggaccggatcatcgccgtgctgcccttcttccatgtc
ttcgccaatacctgcacgctcaaccggacggtggtgaatgggggcgagatggtgatgctg
ccgcgcttcgacgcggcgcaggtgctggcggctgtgcagcgggtcaaggcgacgtcgctg
cccggcgtgccgacgatgttccaggcgctgctggaccatcccgccatccgcaacatcgat
ttctcctccctgcgggcctgcatttccggcggcgcgccattggcgctggagttgaagcag
aagttcgaggcggcgaccggcgccaaactgatcgaaggctatggcctgaccgaaaccagt
ccgatcgtctgcaccaatccctatgaggggttgaacaagagcgggacggtgggtcagccg
gtgccagggacgcgggtgaagctggtcgatcgtgaagacccgacccgcccgccggccgaa
ggcgaaccgggcgaactgctctttgccgggccgcagatcatgaagggctattggaaccgg
ccggacgccgatgccgaagtgttcgtcggcgactatgtccgcaccggcgatgtcggcctg
gtcgacgaggacggctatgtgaagatcgtagaccggttgaaggacatgatcgcggtcggc
ggcttcaaggtgtttccaagccaggtggaatcggtcctgtatcaccatcctgcggtcaag
gaggcgctggtgatcggcatacccgaccattatcgcggtgagcagcccaaggcgttcgtg
accctgaacgaaggcgcggagatggacggcggggcgctcatggactggctcaatccgcaa
ctgggcaagcatgagcgggtctgcgcggtcgaggtgcggctgaacctgcccaagacgctg
gtgggcaagctgtcgcgcaaggaactggtggccgaagagcgcgccaaggcggacgcggcg
cgggcggaggctggaaccgcggcgtga
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