Sphingobium sp. AntQ-1: sphantq_03557
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Entry
sphantq_03557 CDS
T10291
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spag Sphingobium sp. AntQ-1
Brite
Enzymes [BR:
spag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
sphantq_03557 (recB)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
sphantq_03557 (recB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WCP15100
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Position
1:complement(3577889..3581362)
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AA seq
1157 aa
AA seq
DB search
MAATMAKTRALQKLLGDQARAAAPDAHVWLSASAGTGKTHVLTARVFRLLLQGVRPENIL
CLTFTKAGAAEMADRIHDRLAAWVQMEEVDLFNDLEALGEESGPEARDYARRLFAEVLES
TGGGLRIQTIHGFCQQLLTAFPLEAELTPGFRPLDQREQSSLARQTLADMAVRAHDGDDA
ALIGALQAISLRLGEGGAEQFLLRCAATGDALDALPEAIGPWLAQELELPEGDIDQWLAD
QCSDTMFDMRTLDGIVRANVEWGKGRGLERCDRIAAWRALDPAGRAATLGDLHRAWSKAD
GDLIDAKGWVPPIDGYIEMAARLYDRCGALIAMKLRADYAALLGQALHAGRAYARDYAKA
KRLAGAVDFDDLIARTAALLEQPGIAEWIRYKLDQRIDHILVDEAQDTNIRQWQIVAALT
SEFFAGEGAKGDKVRTVFAVGDFKQAIFGFQGTSPAEFRAARIAFSRYADEAGHDFFNLS
LDQSFRSTPAVLEVVDRTIATLRAERLGMDAGEVRHVSANRHPGEVQLWKPVVAGLSEDA
EGEEDWAADQERVLAGKIARQIKQWIDDGLMLESRGRPVRAGDIMILVRRRSELARLIVA
RLYEEKVAVAGIDRLRLNAPLAVRDLLAALRFAVQPEDELNLASLLVSPLIGWTQDELMV
RLIGRKIGAGLWRHLQQTMDDATLKPLRDLLAVADFTTPYRYLEAILSGHMDGRRRLVER
LGTEAADPIEELLNAALAFESDDHPSLQRFIDWFDRGEVEIVRDAAAQGDMLRLLTVHGA
KGLQAPIVILADACLDPDAGNRSDSLLWNGLPILAPRKPERQGPIGDVAEAAAQVEREEH
WRLLYVALTRAEEKLIVAGSLGPRAKGEVKPESWYAAVEGAMISLDTDWEADPLWGGVRR
WRGTEQLEPRKAEGEEARASMPVVQPAWLREPAPAESRPPRPLAPSAPVEDDMPYPPPTQ
AMRAAAERGRWLHALFERLPDLSAERRRDAADRWLVQQGVGDAAQRHDLIDQAIRVIEAP
DFAALFGPDALAEAPIAAVVGEAVIAGTVDRLSIGADRIQLVDFKTGRIAPLTLAEVPTA
HIRQMAAYVAALGVIFPDRTIEAGLLYTSAPRLIILPPAVLAAHQPGLAPFAAQKPDYLP
AQENLPLSPVERDAHPS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgatggctaagacccgcgcgcttcagaaattgctgggcgatcaggcgcgc
gccgccgcgcccgacgcccatgtctggctgtcggcgtcggccgggaccggcaagacccat
gtgctgaccgcgcgcgtgtttcgcctgctgctgcaaggggtgcggccggaaaatatcctc
tgcctcaccttcaccaaggcgggcgcggcggaaatggccgaccgcatccatgatcgcctg
gccgcctgggtgcagatggaagaggtcgacctgttcaacgacctggaggcgctgggcgaa
gagtccgggccggaggcgcgcgactatgcccggcgtctgttcgccgaagtgctggaatcg
accggcggcgggctgcgcatccagaccatccatggtttttgccagcaattgctgaccgct
tttccgctggaggccgaattgacgccgggcttccgcccgctcgaccagcgcgaacaatcg
agcctggcgcgccagacgctggccgacatggcggtgcgtgcgcatgacggggacgacgca
gcgctgatcggcgcattgcaggcgatcagcctgcgcttgggcgagggcggggccgaacag
tttctgttgcgctgcgcggcgacgggcgacgcgctcgatgcgctaccggaggcgatcggg
ccttggctggcgcaggaactggagctgcccgaaggcgatatcgatcaatggcttgccgac
caatgttctgacacgatgttcgacatgcgcacgctggacgggatcgtgcgcgccaatgtg
gaatggggcaagggccgggggctggagcggtgcgatcgcatcgctgcgtggcgcgcgctc
gatccggccgggcgggcggcgacgctgggcgatctccatcgtgcctggagcaaggcggac
ggagacctgatcgacgccaagggctgggtgccgccgatcgacggttacatcgagatggcg
gcgcggctgtacgacaggtgcggcgcgctgatcgcgatgaagttgcgcgccgactacgcc
gcgctgctgggtcaggcgctccatgccgggcgggcctatgcgcgtgattatgccaaggcc
aagcggctggccggcgcggtcgatttcgacgatctgatcgcgcgcaccgccgccttgctg
gaacagcccggcatcgccgaatggattcgttacaagctggaccagcggatcgaccatata
ttggtggatgaggcgcaggacaccaatatccgacagtggcagattgtagccgctttaacg
tctgaattcttcgctggcgaaggcgcaaagggcgacaaagtcagaactgttttcgccgtc
ggcgacttcaagcaagccattttcggctttcaggggactagtcccgccgagtttcgcgcg
gcccgcatagctttttcgcgatatgcagatgaagctgggcatgatttcttcaacctgtcg
ctcgaccagagttttcgctcgacgcccgccgtgctggaggtggtggaccgcaccatcgcc
acgctgcgcgccgaacggctgggtatggacgcgggtgaggtgcgccatgtcagcgccaat
cggcatccgggtgaagtgcaattgtggaagcccgtcgtcgcgggtctgtcggaagatgcg
gaaggcgaggaggattgggcggccgatcaggagcgggtgctggccggcaagatcgcgcgg
cagatcaagcagtggatcgacgatgggctgatgctcgaaagccgggggcggccggtgcgc
gcgggcgacatcatgatcctggtgcgccgccgcagcgaactggcgcggcttatcgtcgcg
cggctttatgaggagaaggtggcggtggccgggatcgaccggttgcggctcaacgcgccg
ctggccgtgcgcgacctgctcgccgcattgcgctttgcggtgcagccggaagatgagctg
aacctggcgtccctgctggtatcaccgttgatcggctggacgcaggacgaactgatggtg
cggctgatcggccgcaagatcggtgcgggtctgtggcgacatctccagcagacgatggac
gatgctacgctaaaaccgctgcgcgatctgctggcggtggcggatttcaccacgccctat
cgctatctggaggcgatattgtcggggcatatggacgggcggcggcggctggtcgagcgg
ctggggaccgaggccgccgatccgatcgaggaattgctgaacgccgcgcttgcgttcgaa
agcgacgatcatccctcgctccagcgcttcatcgactggttcgaccggggcgaggtggag
atcgtccgcgatgccgcggcgcagggcgacatgctccggctgctgaccgtgcatggcgcc
aagggtttgcaggcgccgatcgtcatcctggccgacgcctgcctcgaccccgatgcgggc
aaccggtcggactcgctgctgtggaacggcctgccgatcctggccccgcgcaagcccgaa
cggcaggggccgatcggcgacgtcgccgaagcggccgcacaggtggagcgggaggagcat
tggcggctgctctatgtcgcgctgactcgtgcagaagagaagctgatcgtcgccgggtcg
ctcggcccccgcgccaagggggaggtgaagccggaaagctggtatgcggcggtcgaaggg
gcgatgatatcgctggatacagactgggaggccgatccgctatggggcggggtgcgccgc
tggcgcgggacggagcaactggagccgcgcaaggcggagggggaagaggcgcgcgcgtcg
atgccggtcgtccagcccgcatggctgcgcgaaccggcccccgccgaatcacgcccgccc
cggccgctcgcgccgtccgccccggtagaggatgacatgccctatccgccaccgacgcag
gcgatgcgggccgcggccgaacgcgggcgctggctccacgcgctgtttgaacggctgccc
gacctgtccgccgagcggcgacgcgatgcggcggatcgctggctggtccagcagggcgtg
ggcgatgcggcgcagcgccatgacctcatcgaccaggcgatcagggtgatcgaagcgccg
gatttcgcggccctgttcggccccgatgcgctggccgaagcgccgatcgcggccgtggtg
ggcgaggcggtgatcgccggcaccgtcgaccggctgtctatcggcgcggatcgcatccag
ttggtcgatttcaagaccgggcggatcgcgccgctgaccctggcagaagtgccaaccgcc
catatccggcagatggccgcctatgtcgcggcgctgggcgtgatcttccccgaccggacg
atcgaggcggggctgctctacaccagcgcgccgcgactgatcatcctgccgcccgcggtg
ctggcggcgcaccagccgggcctcgcgccgtttgcggcgcagaagcccgactatctgccc
gcgcaggagaatttgccgctctcacccgttgagcgggatgcgcacccgtcctag
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