Sphingobium sp. AntQ-1: sphantq_03694
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Entry
sphantq_03694 CDS
T10291
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
sphantq_03694 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_03694 (recO)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
sphantq_03694 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
sphantq_03694 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WCP15233
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All DBs
Position
1:complement(3716278..3717012)
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AA seq
244 aa
AA seq
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MPSLSTTAIVCAVRHHGEHGAIIRLLTPDHGLLPGYVRGGRSRALRPVLLPGNIVKADFR
ARTEDQLAGLTVELAQSRAPLLAEPLPAVAIDWSCALTAAALPEGTPYPALHQALDGVLG
AVEAAPAARGWAVALVRYELLLLAELGFGLDLTRCAVGGDTDDLAYVSPRSAAAVSRAAA
VGYEARLLPLPPFLIEGGMGDWTQILDGLRLTGFFLERSILIDRRADILAARERLVDRLK
RAVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcagcaccaccgcgatcgtttgcgccgtgcgccatcatggcgaacatggc
gcgattatacggctgctgacgcccgatcatggcctgctacccggctatgtccgtggcggt
cggtcgcgggctttgcgcccggtgctgcttcccggcaatatcgtgaaggccgatttccgc
gcccggacggaggatcaactggccggcctgaccgtcgaactggcgcagagccgtgcgccg
ctgctggctgaaccgctgccggccgtggcgatcgactggagctgcgccctgaccgccgcg
gcgctgccggaaggtacgccctatccggcgttgcatcaggcgctcgacggcgtgctgggc
gcggtggaggcggccccggcggcgcgcggctgggcggtggcgctggtgcgctacgaattg
ctgctgctggccgaactgggcttcggcctcgacctgacgcgctgcgccgtgggcggggat
acggacgacctcgcctatgtcagcccgcgcagcgccgcagcggtcagccgcgcggcggcg
gtcggctatgaagcccggttgctgccgctgccccccttcctgatcgaaggcggcatgggc
gactggacgcagatattggacgggctgcgcctcaccggcttcttcctcgaacgctccatc
ctgatcgatcggcgcgccgacatactcgcggcgcgcgaaagactggtcgaccggctgaaa
agggcggttgcgtga
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