Sphingobium sp. AntQ-1: sphantq_03923
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Entry
sphantq_03923 CDS
T10291
Symbol
hup_2
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
spag Sphingobium sp. AntQ-1
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spag03032
]
sphantq_03923 (hup_2)
03036 Chromosome and associated proteins [BR:
spag03036
]
sphantq_03923 (hup_2)
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_03923 (hup_2)
DNA replication proteins [BR:
spag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
sphantq_03923 (hup_2)
Chromosome and associated proteins [BR:
spag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
sphantq_03923 (hup_2)
DNA repair and recombination proteins [BR:
spag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
sphantq_03923 (hup_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WCP15456
LinkDB
All DBs
Position
2:206148..206423
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDLADALAGEHDLTKADARKLVDAVFVQIAGAAAKGEEISLNGFGKFKVKDSPAREG
RNPSTGATIQIAASKKLTFTPAKAVKDQLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatagcgacctagccgacgccctcgccggcgagcatgacctcaccaaggctgat
gctcgcaagctcgtcgacgccgtattcgtgcagatcgccggcgctgctgcgaaaggcgaa
gaaatctcgctaaacggcttcggcaaattcaaggtcaaggatagcccggcccgtgaaggc
cgcaacccctcgactggcgcgaccattcagatcgctgcgtcgaaaaagcttacgttcacg
ccggcgaaggccgtgaaggatcagctgaacggctga
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